RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 PARNO95453 639 aaKnown RBP6.38□□□□□ -1.39
SMAD3-209ENST00000558894 CPA1P15085 419 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 GNAQP50148 359 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 HTRA4P83105 476 aaPredicted RBP6.38□□□□□ -1.39
SMAD3-209ENST00000558894 MGAT3Q09327 533 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 GRB10Q13322 594 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 NEDD9Q14511 834 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 CCDC85BQ15834 202 aaPredicted RBP6.38□□□□□ -1.39
SMAD3-209ENST00000558894 GNPTABQ3T906 1256 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 DHX32Q7L7V1 743 aaKnown RBP6.38□□□□□ -1.39
SMAD3-209ENST00000558894 MICU3Q86XE3 530 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 CRIPAKQ8N1N5 446 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 FBXL16Q8N461 479 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 CCDC82Q8N4S0 544 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 DBF4BQ8NFT6 615 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 SMARCC2Q8TAQ2 1214 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 SP7Q8TDD2 431 aaPredicted RBP6.38□□□□□ -1.39
SMAD3-209ENST00000558894 LMBR1Q8WVP7 490 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 GPRASP2Q96D09 838 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 GAS2L1Q99501 681 aaPredicted RBP6.38□□□□□ -1.39
SMAD3-209ENST00000558894 USP26Q9BXU7 913 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 AGXT2Q9BYV1 514 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 FTOQ9C0B1 505 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMAD3-209ENST00000558894 PSTPIP2Q9H939 334 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 EHMT1Q9H9B1 1298 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 JADE2Q9NQC1 790 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 SETD4Q9NVD3 440 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 PCDHA6Q9UN73 950 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 NOD1Q9Y239 953 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 PCDHA8Q9Y5H6 950 aa6.38□□□□□ -1.39
SMAD3-209ENST00000558894 IGLV3-22A0A075B6J6 115 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 IGKV6D-21A0A0A0MT36 114 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 C17orf102A2RUQ5 167 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 MBLAC1A4D2B0 266 aaPredicted RBP6.37□□□□□ -1.39
SMAD3-209ENST00000558894 LINC01553A4QN01 128 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 RSPH10B2B2RC85 870 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 STXBP3O00186 592 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 CDC45O75419 566 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 ATG7O95352 703 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 CHRNA1P02708 482 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 LINC00271P0C7V0 271 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 RSPH10BP0C881 870 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 ARP10275 920 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 BMP1P13497 986 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 HSPA4P34932 840 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 TCF7P36402 384 aaPredicted RBP6.37□□□□□ -1.39
SMAD3-209ENST00000558894 THPOP40225 353 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 ITGB3BPQ13352 177 aaPredicted RBP6.37□□□□□ -1.39
SMAD3-209ENST00000558894 NTRK3Q16288 839 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 PKN1Q16512 942 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 TJAP1Q5JTD0 557 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 NFXL1Q6ZNB6 911 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 RUFY4Q6ZNE9 571 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 RPAINQ86UA6 219 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 ATXN2LQ8WWM7 1075 aaKnown RBP6.37□□□□□ -1.39
SMAD3-209ENST00000558894 PPM1EQ8WY54 764 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 ATP6V0A1Q93050 837 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 ZBTB10Q96DT7 871 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 PGBD1Q96JS3 809 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 ASB2Q96Q27 587 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 SUGCTQ9HAC7 445 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 RC3H2Q9HBD1 1191 aaKnown RBP6.37□□□□□ -1.39
SMAD3-209ENST00000558894 RIC8AQ9NPQ8 531 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 KCNH7Q9NS40 1196 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 TMEM260Q9NX78 707 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 SEC63Q9UGP8 760 aaKnown RBP6.37□□□□□ -1.39
SMAD3-209ENST00000558894 SNX14Q9Y5W7 946 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 V9GY48 417 aaPredicted RBP6.37□□□□□ -1.39
SMAD3-209ENST00000558894 BRWD1Q9NSI6 2320 aa6.37□□□□□ -1.39
SMAD3-209ENST00000558894 NCOR1O75376 2440 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 C5orf42Q9H799 3197 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 NFASCO94856 1347 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 EMSYQ7Z589 1322 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 NRCAMQ92823 1304 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 KLF18A0A0U1RQI7 1052 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 FAM86B1E9PN63 330 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 MEIS1O00470 390 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 MAFGO15525 162 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 DHX15O43143 795 aaKnown RBP6.36□□□□□ -1.39
SMAD3-209ENST00000558894 ZBTB43O43298 467 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 TLL1O43897 1013 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 CAND2O75155 1236 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 CCNE2O96020 404 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 FAM86B2P0C5J1 330 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 PRKCSHP14314 528 aaPredicted RBP6.36□□□□□ -1.39
SMAD3-209ENST00000558894 IGFBP4P22692 258 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 ADD1P35611 737 aaKnown RBP6.36□□□□□ -1.39
SMAD3-209ENST00000558894 RCAN1P53805 252 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 EVCP57679 992 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 ERVK-21P61565 698 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 TFF2Q03403 129 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 C1QBPQ07021 282 aaKnown RBP6.36□□□□□ -1.39
SMAD3-209ENST00000558894 MTMR1Q13613 665 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 IKBKEQ14164 716 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 UTP14CQ5TAP6 766 aaKnown RBP6.36□□□□□ -1.39
SMAD3-209ENST00000558894 PPP1R18Q6NYC8 613 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 HEATR3Q7Z4Q2 680 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 NLRX1Q86UT6 975 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 TEX2Q8IWB9 1127 aa6.36□□□□□ -1.39
SMAD3-209ENST00000558894 GIMAP8Q8ND71 665 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms