RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 RIT2Q99578 217 aa17.9■□□□□ 0.46
RABGGTA-205ENST00000558534 C16orf70Q9BSU1 422 aa17.9■□□□□ 0.46
RABGGTA-205ENST00000558534 PKD2L1Q9P0L9 805 aa17.9■□□□□ 0.46
RABGGTA-205ENST00000558534 MYH9P35579 1960 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-205ENST00000558534 CYP3A7-CYP3A51PA0A087WV96 503 aa17.89■□□□□ 0.45
RABGGTA-205ENST00000558534 C17orf102A2RUQ5 167 aa17.89■□□□□ 0.45
RABGGTA-205ENST00000558534 TRIM43BA6NCK2 446 aa17.89■□□□□ 0.45
RABGGTA-205ENST00000558534 PITPNM1O00562 1244 aa17.89■□□□□ 0.45
RABGGTA-205ENST00000558534 SORBS3O60504 671 aa17.89■□□□□ 0.45
RABGGTA-205ENST00000558534 ARP10275 920 aa17.89■□□□□ 0.45
RABGGTA-205ENST00000558534 CYP3A7P24462 503 aa17.89■□□□□ 0.45
RABGGTA-205ENST00000558534 MDM2Q00987 491 aaPredicted RBP17.89■□□□□ 0.45
RABGGTA-205ENST00000558534 MIS18BP1Q6P0N0 1132 aa17.89■□□□□ 0.45
RABGGTA-205ENST00000558534 TRIM43Q96BQ3 446 aaPredicted RBP17.89■□□□□ 0.45
RABGGTA-205ENST00000558534 COLQQ9Y215 455 aaPredicted RBP17.89■□□□□ 0.45
RABGGTA-205ENST00000558534 JAK2O60674 1132 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 SLC34A2O95436 690 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 PFKMP08237 780 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 SFNP31947 248 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 RFC2P35250 354 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 ACTR2P61160 394 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 UTP14CQ5TAP6 766 aaKnown RBP17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 KRT40Q6A162 431 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 PPP4R3AQ6IN85 833 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 PLPPR4Q7Z2D5 763 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 RPUSD2Q8IZ73 545 aaKnown RBP17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 TDHQ8IZJ6 230 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 CYP2W1Q8TAV3 490 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 BADQ92934 168 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 TEKT3Q9BXF9 490 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 TRPV6Q9H1D0 765 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 MTIF3Q9H2K0 278 aaKnown RBP17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 NRCAMQ92823 1304 aa17.88■□□□□ 0.45
RABGGTA-205ENST00000558534 TANC1Q9C0D5 1861 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 MARCH6O60337 910 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 GAS7O60861 476 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 CAND2O75155 1236 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 LGR5O75473 907 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 BAG4O95429 457 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 JAK3P52333 1124 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 PTK7Q13308 1070 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 NPY5RQ15761 445 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 INF2Q27J81 1249 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 LETM2Q2VYF4 491 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 PSRC1Q6PGN9 363 aaPredicted RBP17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 PIK3AP1Q6ZUJ8 805 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 SH3RF1Q7Z6J0 888 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 DIS3L2Q8IYB7 885 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 RDM1Q8NG50 284 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 AFAP1L1Q8TED9 768 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 TMX3Q96JJ7 454 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 TRMT13Q9NUP7 481 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 HDAC6Q9UBN7 1215 aa17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 DDX25Q9UHL0 483 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-205ENST00000558534 GSTTP1A0A1W2PQM5 241 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 RRN3P2A6NIE6 340 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 WDR64B1ANS9 1081 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 BACH1O14867 736 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 TBX3O15119 743 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 ATG7O95352 703 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 PSAPP07602 524 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 STAT5BP51692 787 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 ITGB3BPQ13352 177 aaPredicted RBP17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 ORC2Q13416 577 aaPredicted RBP17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 LRCH2Q5VUJ6 765 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 FAM20AQ96MK3 541 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 NOC4LQ9BVI4 516 aaKnown RBP17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 PPP1R12CQ9BZL4 782 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 FOXP1Q9H334 677 aaPredicted RBP17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 PRO3102Q9H379 93 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 SAMM50Q9Y512 469 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 PCDHA10Q9Y5I2 948 aa17.86■□□□□ 0.45
RABGGTA-205ENST00000558534 CCNT1O60563 726 aaKnown RBP17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 SMIM10L2AP0DMW4 78 aa17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 SMIM10L2BP0DMW5 78 aa17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 HABP4Q5JVS0 413 aaKnown RBP17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 GDF6Q6KF10 455 aaPredicted RBP17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 RSPH3Q86UC2 560 aa17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 SLFN12Q8IYM2 578 aa17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 FBXO18Q8NFZ0 1043 aa17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 SLC5A5Q92911 643 aa17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 ATP6V0A1Q93050 837 aa17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 FAM167AQ96KS9 214 aa17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 MBOAT7Q96N66 472 aa17.85■□□□□ 0.45
RABGGTA-205ENST00000558534 DDX39AO00148 427 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 MSH4O15457 936 aa17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 DKC1O60832 514 aaKnown RBP eCLIP17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 RBL2Q08999 1139 aa17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 ST3GAL1Q11201 340 aa17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 PPFIA1Q13136 1202 aa17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 TAF2Q6P1X5 1199 aa17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 LENG9Q96B70 501 aa17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 ZNF302Q9NR11 478 aa17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 NOL7Q9UMY1 257 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 CEP131Q9UPN4 1083 aa17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 SMC3Q9UQE7 1217 aa17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 TRPC6Q9Y210 931 aa17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 TRIP12Q14669 1992 aaPredicted RBP17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 WDR81Q562E7 1941 aa17.84■□□□□ 0.45
RABGGTA-205ENST00000558534 DHX15O43143 795 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms