RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 WDR78Q5VTH9 848 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 LARGE2Q8N3Y3 721 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 F5H6K3 240 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 SLURP2P0DP57 97 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 KLRC3Q07444 240 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 DLGAP5Q15398 846 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 MIGA2Q7L4E1 593 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 NUDT12Q9BQG2 462 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 RGL1Q9NZL6 768 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 L1RE1Q9UN81 338 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 CAPN6Q9Y6Q1 641 aa16.92■□□□□ 0.3
AP4E1-202ENST00000558439 K7ENM7 598 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 PSMD14O00487 310 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 HGSO14964 777 aaPredicted RBP16.91■□□□□ 0.3
AP4E1-202ENST00000558439 PDE6BP35913 854 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 CETN2P41208 172 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 PPP4CP60510 307 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 CCDC121Q6ZUS5 278 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 FAM212AQ96EL1 285 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 TCHPQ9BT92 498 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 CEP72Q9P209 647 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 ATRNO75882 1429 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 GOLGA8KD6RF30 607 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 MYO1CO00159 1063 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 BACH1O14867 736 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 FOSP01100 380 aaPredicted RBP16.91■□□□□ 0.3
AP4E1-202ENST00000558439 ALAS1P13196 640 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 NAALADL2Q58DX5 795 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 PDXDC1Q6P996 788 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 SPATA20Q8TB22 786 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 DUSP9Q99956 384 aaKnown RBP16.91■□□□□ 0.3
AP4E1-202ENST00000558439 PAIP2Q9BPZ3 127 aaKnown RBP16.91■□□□□ 0.3
AP4E1-202ENST00000558439 ZRANB2O95218 330 aaKnown RBP eCLIP16.91■□□□□ 0.3
AP4E1-202ENST00000558439 MMP10P09238 476 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 NNTQ13423 1086 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 SYDE2Q5VT97 1194 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 MIER3Q7Z3K6 550 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 DNAJC7Q99615 494 aa16.91■□□□□ 0.3
AP4E1-202ENST00000558439 LRRIQ3A6PVS8 624 aaPredicted RBP16.9■□□□□ 0.3
AP4E1-202ENST00000558439 PDCLQ13371 301 aa16.9■□□□□ 0.3
AP4E1-202ENST00000558439 RC3H1Q5TC82 1133 aaKnown RBP16.9■□□□□ 0.3
AP4E1-202ENST00000558439 SYCE1Q8N0S2 351 aa16.9■□□□□ 0.3
AP4E1-202ENST00000558439 NLGN1Q8N2Q7 840 aa16.9■□□□□ 0.3
AP4E1-202ENST00000558439 PPM1KQ8N3J5 372 aa16.9■□□□□ 0.3
AP4E1-202ENST00000558439 RTFDC1Q9BY42 306 aaPredicted RBP16.9■□□□□ 0.3
AP4E1-202ENST00000558439 SEL1L2Q5TEA6 688 aa16.9■□□□□ 0.3
AP4E1-202ENST00000558439 IPO4Q8TEX9 1081 aaKnown RBP16.9■□□□□ 0.3
AP4E1-202ENST00000558439 ZNF384Q8TF68 577 aa16.9■□□□□ 0.3
AP4E1-202ENST00000558439 CCDC114Q96M63 670 aa16.9■□□□□ 0.3
AP4E1-202ENST00000558439 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
AP4E1-202ENST00000558439 CHD2O14647 1828 aaKnown RBP16.9■□□□□ 0.3
AP4E1-202ENST00000558439 BIRC3Q13489 604 aa16.9■□□□□ 0.3
AP4E1-202ENST00000558439 PDIA5Q14554 519 aa16.9■□□□□ 0.3
AP4E1-202ENST00000558439 EZH2Q15910 746 aaKnown RBP16.9■□□□□ 0.3
AP4E1-202ENST00000558439 KIAA0895Q8NCT3 520 aa16.9■□□□□ 0.3
AP4E1-202ENST00000558439 BCRP11274 1271 aa16.89■□□□□ 0.3
AP4E1-202ENST00000558439 SLC51AQ86UW1 340 aa16.89■□□□□ 0.3
AP4E1-202ENST00000558439 DNAAF5Q86Y56 855 aa16.89■□□□□ 0.3
AP4E1-202ENST00000558439 CCDC105Q8IYK2 499 aa16.89■□□□□ 0.3
AP4E1-202ENST00000558439 QTRT2Q9H974 415 aaKnown RBP16.89■□□□□ 0.3
AP4E1-202ENST00000558439 ARHGAP25P42331 645 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 APBA1Q02410 837 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 PROM2Q8N271 834 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 CHURC1Q8WUH1 139 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 ZNF577Q9BSK1 485 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 MTRF1LQ9UGC7 380 aaKnown RBP16.89■□□□□ 0.29
AP4E1-202ENST00000558439 KIF1AQ12756 1690 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 RGPD5Q99666 1765 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 LRRC10BA6NIK2 292 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 RAD17O75943 681 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 CALCOCO2Q13137 446 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 GRIPAP1Q4V328 841 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 TRAPPC11Q7Z392 1133 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 SH2D3AQ9BRG2 576 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 PLVAPQ9BX97 442 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 SH2D4AQ9H788 454 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 KCNK9Q9NPC2 374 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 PLAGL2Q9UPG8 496 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 TRIM66O15016 1216 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 PSMC2P35998 433 aaKnown RBP16.89■□□□□ 0.29
AP4E1-202ENST00000558439 VPS41P49754 854 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 CCNI2Q6ZMN8 369 aaPredicted RBP16.89■□□□□ 0.29
AP4E1-202ENST00000558439 GLIS3Q8NEA6 775 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 ERGIC2Q96RQ1 377 aa16.89■□□□□ 0.29
AP4E1-202ENST00000558439 DHX36Q9H2U1 1008 aaKnown RBP16.89■□□□□ 0.29
AP4E1-202ENST00000558439 CNTNAP4Q9C0A0 1308 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 SLC9A1P19634 815 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 CTNNA2P26232 953 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 NT5C2P49902 561 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 GTF2A1P52655 376 aaPredicted RBP16.88■□□□□ 0.29
AP4E1-202ENST00000558439 NFIAQ12857 509 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 MESDQ14696 234 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 RUFY4Q6ZNE9 571 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 B4GALNT4Q76KP1 1039 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 TNFRSF25Q93038 417 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 ARHGAP20Q9P2F6 1191 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 MTUS1Q9ULD2 1270 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 TESPA1A2RU30 521 aaPredicted RBP16.88■□□□□ 0.29
AP4E1-202ENST00000558439 NR3C1P04150 777 aa16.88■□□□□ 0.29
AP4E1-202ENST00000558439 VIMP08670 466 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms