RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 DHX15O43143 795 aaKnown RBP14□□□□□ -0.17
SMAD3-205ENST00000558428 CCNT1O60563 726 aaKnown RBP14□□□□□ -0.17
SMAD3-205ENST00000558428 CD4P01730 458 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 GCFC2P16383 781 aaKnown RBP14□□□□□ -0.17
SMAD3-205ENST00000558428 CYP3A7P24462 503 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 ACTR2P61160 394 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 PTPN11Q06124 597 aaPredicted RBP14□□□□□ -0.17
SMAD3-205ENST00000558428 CUL4AQ13619 759 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 GNL2Q13823 731 aaKnown RBP14□□□□□ -0.17
SMAD3-205ENST00000558428 C7orf31Q8N865 590 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 TRIM43Q96BQ3 446 aaPredicted RBP14□□□□□ -0.17
SMAD3-205ENST00000558428 MBOAT7Q96N66 472 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 NAP1L4Q99733 375 aaKnown RBP14□□□□□ -0.17
SMAD3-205ENST00000558428 TRPV6Q9H1D0 765 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 TUT1Q9H6E5 874 aaKnown RBP14□□□□□ -0.17
SMAD3-205ENST00000558428 TBC1D22BQ9NU19 505 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 TRMT13Q9NUP7 481 aaKnown RBP14□□□□□ -0.17
SMAD3-205ENST00000558428 HDAC6Q9UBN7 1215 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 DDX25Q9UHL0 483 aaKnown RBP14□□□□□ -0.17
SMAD3-205ENST00000558428 TCEAL9Q9UHQ7 104 aa14□□□□□ -0.17
SMAD3-205ENST00000558428 ZNF215Q9UL58 517 aaPredicted RBP14□□□□□ -0.17
SMAD3-205ENST00000558428 K7ELQ4 463 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-205ENST00000558428 KIAA0355O15063 1070 aa13.99□□□□□ -0.17
SMAD3-205ENST00000558428 SLC37A4O43826 429 aa13.99□□□□□ -0.17
SMAD3-205ENST00000558428 SUPT20HL2P0C7V6 817 aa13.99□□□□□ -0.17
SMAD3-205ENST00000558428 RAG1P15918 1043 aa13.99□□□□□ -0.17
SMAD3-205ENST00000558428 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
SMAD3-205ENST00000558428 GLG1Q92896 1179 aa13.99□□□□□ -0.17
SMAD3-205ENST00000558428 LBHD1Q9BQE6 289 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-205ENST00000558428 FOXP1Q9H334 677 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-205ENST00000558428 GTF2IRD1Q9UHL9 959 aa13.99□□□□□ -0.17
SMAD3-205ENST00000558428 TBX21Q9UL17 535 aa13.99□□□□□ -0.17
SMAD3-205ENST00000558428 NOD1Q9Y239 953 aa13.99□□□□□ -0.17
SMAD3-205ENST00000558428 EMSYQ7Z589 1322 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 GAS7O60861 476 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 CCNE2O96020 404 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 MAGEA10P43363 369 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-205ENST00000558428 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-205ENST00000558428 KRT76Q01546 638 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 LRCH2Q5VUJ6 765 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 PPP4R3AQ6IN85 833 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 GDF6Q6KF10 455 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-205ENST00000558428 ZNF746Q6NUN9 644 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-205ENST00000558428 CHRDL2Q6WN34 429 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 SLC5A5Q92911 643 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 GJA10Q969M2 543 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 SNX21Q969T3 373 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 RIT2Q99578 217 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 TEKT3Q9BXF9 490 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 PPP1R12CQ9BZL4 782 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 SMARCAD1Q9H4L7 1026 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 AZI2Q9H6S1 392 aa13.98□□□□□ -0.17
SMAD3-205ENST00000558428 RANBP2P49792 3224 aaKnown RBP13.98□□□□□ -0.17
SMAD3-205ENST00000558428 H3BQV1 296 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 BACH1O14867 736 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 LGR5O75473 907 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 ATG7O95352 703 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 SMIM10L2AP0DMW4 78 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 SMIM10L2BP0DMW5 78 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 CYP2C9P11712 490 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 ITGB8P26012 769 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 MARK3P27448 753 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 PTGISQ16647 500 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 MIS18BP1Q6P0N0 1132 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 ABHD15Q6UXT9 468 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 HSCBQ8IWL3 235 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 SMAP1Q8IYB5 467 aaPredicted RBP13.97□□□□□ -0.17
SMAD3-205ENST00000558428 ETNPPLQ8TBG4 499 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 PCYT2Q99447 389 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 HIPK3Q9H422 1215 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 ERAP1Q9NZ08 941 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 SAMM50Q9Y512 469 aa13.97□□□□□ -0.17
SMAD3-205ENST00000558428 C17orf102A2RUQ5 167 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 KIF28PB7ZC32 967 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 CHMP2AO43633 222 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 MARCH6O60337 910 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 PSMD10O75832 226 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 TIMP1P01033 207 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 ATP2B1P20020 1258 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 STAT5BP51692 787 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 FAM160B1Q5W0V3 765 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 LARP1BQ659C4 914 aaKnown RBP13.96□□□□□ -0.17
SMAD3-205ENST00000558428 MCTP1Q6DN14 999 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 NOSTRINQ8IVI9 506 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 BADQ92934 168 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 FAM20AQ96MK3 541 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 GDF15Q99988 308 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 UNC45AQ9H3U1 944 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 RNPEPQ9H4A4 650 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 KCNMB3Q9NPA1 279 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 PCDHA10Q9Y5I2 948 aa13.96□□□□□ -0.17
SMAD3-205ENST00000558428 TRIOBPQ9H2D6 2365 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 IGKV6D-21A0A0A0MT36 114 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 WDR64B1ANS9 1081 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 WNT7AO00755 349 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 TBX3O15119 743 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 PSAPP07602 524 aa13.95□□□□□ -0.18
SMAD3-205ENST00000558428 U2AF2P26368 475 aaKnown RBP eCLIP13.95□□□□□ -0.184e-6■■■□□ 18.9
SMAD3-205ENST00000558428 CYP2C18P33260 490 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms