RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 PLCD4Q9BRC7 762 aa12.26□□□□□ -0.45
PCAT29-201ENST00000558411 ISCA1Q9BUE6 129 aa12.26□□□□□ -0.45
PCAT29-201ENST00000558411 OSBPL1AQ9BXW6 950 aa12.26□□□□□ -0.45
PCAT29-201ENST00000558411 ARHGEF3Q9NR81 526 aa12.26□□□□□ -0.45
PCAT29-201ENST00000558411 CEP72Q9P209 647 aa12.26□□□□□ -0.45
PCAT29-201ENST00000558411 CNTNAP5Q8WYK1 1306 aa12.26□□□□□ -0.45
PCAT29-201ENST00000558411 LAD1O00515 517 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 PLEKHA8P1O95397 391 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 NPTXRO95502 500 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 VIMP08670 466 aaKnown RBP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 CALML3P27482 149 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 ABL2P42684 1182 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 NLRP5P59047 1200 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 MRPS35P82673 323 aaKnown RBP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 ATP11AP98196 1134 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 DHX9Q08211 1270 aaKnown RBP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 BNIP1Q12981 228 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 SFMBT2Q5VUG0 894 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 FOXR2Q6PJQ5 311 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 DDX42Q86XP3 938 aaKnown RBP eCLIP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 DZIP3Q86Y13 1208 aaKnown RBP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 NAF1Q96HR8 494 aaKnown RBP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 ECT2Q9H8V3 914 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 ARMT1Q9H993 441 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 PAPOLBQ9NRJ5 636 aaKnown RBP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 ANAPC4Q9UJX5 808 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 PNMA2Q9UL42 364 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 IGF2BP3O00425 579 aaKnown RBP eCLIP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 KCNK3O14649 394 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 UBOX5O94941 541 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 FLT3P36888 993 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 PDE6CP51160 858 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 COPS2P61201 443 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 STK4Q13043 487 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 LBRQ14739 615 aaKnown RBP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 TAF11Q15544 211 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 SGSM1Q2NKQ1 1148 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 FAM43BQ6ZT52 329 aaPredicted RBP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 GALNT15Q8N3T1 639 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 ELAC2Q9BQ52 826 aaKnown RBP12.25□□□□□ -0.45
PCAT29-201ENST00000558411 TRIM9Q9C026 710 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 ATP6V0A2Q9Y487 856 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 LRRC42Q9Y546 428 aa12.25□□□□□ -0.45
PCAT29-201ENST00000558411 RGPD5Q99666 1765 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 CCDC169A6NNP5 214 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 O00370 1275 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 DAPK3O43293 454 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 ATP8B3O60423 1300 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 SNX3O60493 162 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 CAND2O75155 1236 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 ZPR1O75312 459 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 SCG2P13521 617 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 ITGA6P23229 1130 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 SKIV2L2P42285 1042 aaKnown RBP12.24□□□□□ -0.45
PCAT29-201ENST00000558411 MSH2P43246 934 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 CTCFP49711 727 aaPredicted RBP12.24□□□□□ -0.45
PCAT29-201ENST00000558411 DNA2P51530 1060 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 AMPD3Q01432 767 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 TRIM28Q13263 835 aaKnown RBP12.24□□□□□ -0.45
PCAT29-201ENST00000558411 CCDC178Q5BJE1 867 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 MTHFD1LQ6UB35 978 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 TMC4Q7Z404 712 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 ERICH1Q86X53 443 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 COL23A1Q86Y22 540 aaPredicted RBP12.24□□□□□ -0.45
PCAT29-201ENST00000558411 RASGEF1CQ8N431 466 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 MAGEB6Q8N7X4 407 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 VGLL2Q8N8G2 317 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 ENAHQ8N8S7 591 aaPredicted RBP12.24□□□□□ -0.45
PCAT29-201ENST00000558411 TTLL11Q8NHH1 800 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 KLHL29Q96CT2 875 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 AK8Q96MA6 479 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 ZSCAN10Q96SZ4 725 aaPredicted RBP12.24□□□□□ -0.45
PCAT29-201ENST00000558411 ADAM7Q9H2U9 754 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 SEMA6BQ9H3T3 888 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 ABCF3Q9NUQ8 709 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 INTS9Q9NV88 658 aaKnown RBP12.24□□□□□ -0.45
PCAT29-201ENST00000558411 CTNNAL1Q9UBT7 734 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.24□□□□□ -0.45
PCAT29-201ENST00000558411 MYH4Q9Y623 1939 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 ATAD5Q96QE3 1844 aa12.24□□□□□ -0.45
PCAT29-201ENST00000558411 LRRD1A4D1F6 860 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 CEP104O60308 925 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 AGTP01019 485 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 CNGA1P29973 690 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 RNASE9P60153 205 aaKnown RBP12.23□□□□□ -0.45
PCAT29-201ENST00000558411 LRRC63Q05C16 580 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 TROAPQ12815 778 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 ASRGL1Q7L266 308 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 STMN4Q9H169 189 aaPredicted RBP12.23□□□□□ -0.45
PCAT29-201ENST00000558411 ADAM22Q9P0K1 906 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 PACSIN2Q9UNF0 486 aaPredicted RBP12.23□□□□□ -0.45
PCAT29-201ENST00000558411 UTP11Q9Y3A2 253 aaKnown RBP12.23□□□□□ -0.45
PCAT29-201ENST00000558411 USP15Q9Y4E8 981 aaPredicted RBP12.23□□□□□ -0.45
PCAT29-201ENST00000558411 UBR2Q8IWV8 1755 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 DUOX1Q9NRD9 1551 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 GPR75-ASB3A0A0A6YYF3 556 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 hCG_1642624A0A1W2PR95 340 aa12.23□□□□□ -0.45
PCAT29-201ENST00000558411 EVI5O60447 810 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms