RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 ADCY6O43306 1168 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 KINO60870 393 aaKnown RBP8.97□□□□□ -0.97
RTF1-205ENST00000558298 ADAMTS4O75173 837 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 DUSP11O75319 330 aaKnown RBP8.97□□□□□ -0.97
RTF1-205ENST00000558298 CDKL5O76039 1030 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 SCG2P13521 617 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 RXRAP19793 462 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 PLA2G4AP47712 749 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 SNAP25P60880 206 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 CCZ1BP86790 482 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 CCZ1P86791 482 aaPredicted RBP8.97□□□□□ -0.97
RTF1-205ENST00000558298 CNTN2Q02246 1040 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 AP3B2Q13367 1082 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 SNX17Q15036 470 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 USH1GQ495M9 461 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 CPLX2Q6PUV4 134 aaKnown RBP8.97□□□□□ -0.97
RTF1-205ENST00000558298 NSMFQ6X4W1 530 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 NECAB2Q7Z6G3 386 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 LUZP1Q86V48 1076 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 HOMER1Q86YM7 354 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 CCDC144CPQ8IYA2 1237 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 CCDC12Q8WUD4 166 aaPredicted RBP8.97□□□□□ -0.97
RTF1-205ENST00000558298 GOLGA1Q92805 767 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 ZNF396Q96N95 335 aaPredicted RBP8.97□□□□□ -0.97
RTF1-205ENST00000558298 ZMYND12Q9H0C1 365 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 C11orf49Q9H6J7 331 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 GDPD2Q9HCC8 539 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 ZNF446Q9NWS9 450 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 DACT1Q9NYF0 836 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 DONSONQ9NYP3 566 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 COL20A1Q9P218 1284 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 LAMA3Q16787 3333 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 ATXN2Q99700 1313 aaKnown RBP8.97□□□□□ -0.97
RTF1-205ENST00000558298 MYH7BA7E2Y1 1941 aa8.96□□□□□ -0.97
RTF1-205ENST00000558298 PTPDC1A2A3K4 754 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 GCOM1H8Y6P7 765 aaPredicted RBP8.96□□□□□ -0.98
RTF1-205ENST00000558298 STXBP3O00186 592 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 MEIS2O14770 477 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 TADA3O75528 432 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 POLR2MP0CAP2 368 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 OAS2P29728 719 aaKnown RBP8.96□□□□□ -0.98
RTF1-205ENST00000558298 ADD1P35611 737 aaKnown RBP8.96□□□□□ -0.98
RTF1-205ENST00000558298 CLK2P49760 499 aaKnown RBP8.96□□□□□ -0.98
RTF1-205ENST00000558298 AK2P54819 239 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 CORO7P57737 925 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 DNM1Q05193 864 aaKnown RBP8.96□□□□□ -0.98
RTF1-205ENST00000558298 LRMPQ12912 555 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 ACVR2BQ13705 512 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 PKN1Q16512 942 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 PRAMEF19Q5SWL8 479 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 C1orf53Q5VUE5 145 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 WWC2Q6AWC2 1192 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 IQSEC1Q6DN90 963 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 CCSAPQ6IQ19 270 aaPredicted RBP8.96□□□□□ -0.98
RTF1-205ENST00000558298 GALNT17Q6IS24 598 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 CEP112Q8N8E3 955 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 CCDC148Q8NFR7 591 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 FAM71BQ8TC56 605 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 BICD2Q8TD16 824 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 GTF3C6Q969F1 213 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 EMID1Q96A84 441 aaPredicted RBP8.96□□□□□ -0.98
RTF1-205ENST00000558298 PPP1R13BQ96KQ4 1090 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 RMDN3Q96TC7 470 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 PDCD2LQ9BRP1 358 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 LLPHQ9BRT6 129 aaKnown RBP8.96□□□□□ -0.98
RTF1-205ENST00000558298 TSEN34Q9BSV6 310 aaKnown RBP8.96□□□□□ -0.98
RTF1-205ENST00000558298 VIPAS39Q9H9C1 493 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 RIC8AQ9NPQ8 531 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 PXMP2Q9NR77 195 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 FAM184BQ9ULE4 1060 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 TPCN1Q9ULQ1 816 aa8.96□□□□□ -0.98
RTF1-205ENST00000558298 GNEQ9Y223 722 aaKnown RBP8.96□□□□□ -0.98
RTF1-205ENST00000558298 VPS37CA5D8V6 355 aaPredicted RBP8.95□□□□□ -0.98
RTF1-205ENST00000558298 IKBKBO14920 756 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 ARHGAP6O43182 974 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 AP5Z1O43299 807 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 DEXIO95424 95 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 FOSP01100 380 aaPredicted RBP8.95□□□□□ -0.98
RTF1-205ENST00000558298 TGFB3P10600 412 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 RARBP10826 455 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 ICAM3P32942 547 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 PSEN1P49768 467 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 GSCP56915 257 aaPredicted RBP8.95□□□□□ -0.98
RTF1-205ENST00000558298 GJA9P57773 515 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 SCRN1Q12765 414 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 IQCB1Q15051 598 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 LRRC41Q15345 812 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 LRRC26Q2I0M4 334 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 ERCC6LQ2NKX8 1250 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 MAP9Q49MG5 647 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 DUSP28Q4G0W2 176 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 DNAJC21Q5F1R6 531 aaKnown RBP8.95□□□□□ -0.98
RTF1-205ENST00000558298 TYW1BQ6NUM6 668 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 TAPT1Q6NXT6 567 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 CC2D1AQ6P1N0 951 aaPredicted RBP8.95□□□□□ -0.98
RTF1-205ENST00000558298 KCNV1Q6PIU1 500 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 VSIG10LQ86VR7 867 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 C10orf67Q8IYJ2 551 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 TRIM22Q8IYM9 498 aa8.95□□□□□ -0.98
RTF1-205ENST00000558298 DAGLBQ8NCG7 672 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms