RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
RORA-207ENST00000558234 GJA9P57773 515 aa12.97□□□□□ -0.33
RORA-207ENST00000558234 UBXN2AP68543 259 aa12.97□□□□□ -0.33
RORA-207ENST00000558234 DPP9Q86TI2 863 aa12.97□□□□□ -0.33
RORA-207ENST00000558234 SEPT4O43236 478 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 CCNE2O96020 404 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 PTGS1P23219 599 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 GRK4P32298 578 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 ARHGEF6Q15052 776 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 BPIFA3Q9BQP9 254 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 PANK2Q9BZ23 570 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 EHMT1Q9H9B1 1298 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 LGR5O75473 907 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 CELF3Q5SZQ8 465 aaKnown RBP12.96□□□□□ -0.33
RORA-207ENST00000558234 KCNV1Q6PIU1 500 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 CEP89Q96ST8 783 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 RIT2Q99578 217 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
RORA-207ENST00000558234 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.341e-9■■■□□ 15
RORA-207ENST00000558234 CCDC144BQ3MJ40 725 aa12.96□□□□□ -0.34
RORA-207ENST00000558234 KRBA2Q6ZNG9 492 aa12.96□□□□□ -0.34
RORA-207ENST00000558234 PCYT2Q99447 389 aa12.96□□□□□ -0.34
RORA-207ENST00000558234 OGDHLQ9ULD0 1010 aa12.96□□□□□ -0.34
RORA-207ENST00000558234 IGSF9BQ9UPX0 1349 aa12.96□□□□□ -0.34
RORA-207ENST00000558234 ZNF174Q15697 407 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 HYIQ5T013 277 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 EPSTI1Q96J88 318 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 SYNRGQ9UMZ2 1314 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 A6NJR5 290 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 KIAA1468Q9P260 1216 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 DDX25Q9UHL0 483 aaKnown RBP12.95□□□□□ -0.34
RORA-207ENST00000558234 CCDC194A0A1B0GVG4 234 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
RORA-207ENST00000558234 LONP1P36776 959 aaKnown RBP12.95□□□□□ -0.34
RORA-207ENST00000558234 ADCYAP1R1P41586 468 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 AFAP1L1Q8TED9 768 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 CCSER1Q9C0I3 900 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 TSPY26PQ9H489 355 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 KCNH3Q9ULD8 1083 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 MYH11P35749 1972 aa12.95□□□□□ -0.34
RORA-207ENST00000558234 TYRO3Q06418 890 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 PDE4DQ08499 809 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 MTMR1Q13613 665 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 PPTC7Q8NI37 304 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 MKI67P46013 3256 aaKnown RBP12.94□□□□□ -0.34
RORA-207ENST00000558234 HAS3O00219 553 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 DUSP11O75319 330 aaKnown RBP12.94□□□□□ -0.34
RORA-207ENST00000558234 CAPN2P17655 700 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 ABHD15Q6UXT9 468 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 SCFD2Q8WU76 684 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
RORA-207ENST00000558234 GPR20Q99678 358 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 MCOLN1Q9GZU1 580 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 NOL7Q9UMY1 257 aaKnown RBP12.94□□□□□ -0.34
RORA-207ENST00000558234 EMSYQ7Z589 1322 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 GSTTP1A0A1W2PQM5 241 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 CAMK4Q16566 473 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 LY6KQ17RY6 165 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 DHX40Q8IX18 779 aaKnown RBP12.94□□□□□ -0.34
RORA-207ENST00000558234 COL6A1P12109 1028 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 CNNM4Q6P4Q7 775 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 SLC43A3Q8NBI5 491 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 MED15Q96RN5 788 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 TNMDQ9H2S6 317 aa12.94□□□□□ -0.34
RORA-207ENST00000558234 DDX20Q9UHI6 824 aaKnown RBP12.94□□□□□ -0.34
RORA-207ENST00000558234 MYADML2A6NDP7 307 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 MFSD14CQ5VZR4 134 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 SH3TC2Q8TF17 1288 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 CDHR1Q96JP9 859 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 CCNT1O60563 726 aaKnown RBP12.93□□□□□ -0.34
RORA-207ENST00000558234 AKR1A1P14550 325 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 METTL7BQ6UX53 244 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 UNC45AQ9H3U1 944 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 NEMFO60524 1076 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 DPYDQ12882 1025 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 NCAPHQ15003 741 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 LETM2Q2VYF4 491 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 SPECC1Q5M775 1068 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 C11orf57Q6ZUT1 292 aaPredicted RBP12.93□□□□□ -0.34
RORA-207ENST00000558234 RAET1EQ8TD07 263 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 C16orf70Q9BSU1 422 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.93□□□□□ -0.343e-6■■■■□ 22
RORA-207ENST00000558234 UNC93B1Q9H1C4 597 aa12.93□□□□□ -0.34
RORA-207ENST00000558234 B4DLN1 442 aa12.92□□□□□ -0.34
RORA-207ENST00000558234 SLC26A4O43511 780 aa12.92□□□□□ -0.34
RORA-207ENST00000558234 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
RORA-207ENST00000558234 SYKP43405 635 aa12.92□□□□□ -0.34
RORA-207ENST00000558234 PDIA5Q14554 519 aa12.92□□□□□ -0.34
RORA-207ENST00000558234 ZNF746Q6NUN9 644 aaPredicted RBP12.92□□□□□ -0.34
RORA-207ENST00000558234 RDM1Q8NG50 284 aa12.92□□□□□ -0.34
RORA-207ENST00000558234 KAT2BQ92831 832 aa12.92□□□□□ -0.34
RORA-207ENST00000558234 COPS5Q92905 334 aa12.92□□□□□ -0.34
RORA-207ENST00000558234 GJA10Q969M2 543 aa12.92□□□□□ -0.34
RORA-207ENST00000558234 ZFP91Q96JP5 570 aaPredicted RBP12.92□□□□□ -0.34
RORA-207ENST00000558234 CTAGE1Q96RT6 745 aa12.92□□□□□ -0.34
RORA-207ENST00000558234 HSD17B14Q9BPX1 270 aa12.92□□□□□ -0.34
RORA-207ENST00000558234 WRAP73Q9P2S5 460 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms