RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TTLL10Q6ZVT0 673 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 OSTM1Q86WC4 334 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 PTRH1Q86Y79 214 aaKnown RBP5.01□□□□□ -1.61
SPG11-206ENST00000558093 L2HGDHQ9H9P8 463 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 DLL4Q9NR61 685 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 RBPJLQ9UBG7 517 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 COQ6Q9Y2Z9 468 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 TELO2Q9Y4R8 837 aa5.01□□□□□ -1.61
SPG11-206ENST00000558093 PRAMEF25A6NGN4 478 aa5□□□□□ -1.61
SPG11-206ENST00000558093 OTOL1A6NHN0 477 aaPredicted RBP5□□□□□ -1.61
SPG11-206ENST00000558093 DDX3XO00571 662 aaKnown RBP eCLIP5□□□□□ -1.61
SPG11-206ENST00000558093 KCNK3O14649 394 aa5□□□□□ -1.61
SPG11-206ENST00000558093 FBXO21O94952 628 aa5□□□□□ -1.61
SPG11-206ENST00000558093 ASMTLO95671 621 aa5□□□□□ -1.61
SPG11-206ENST00000558093 CYP1A1P04798 512 aaPredicted RBP5□□□□□ -1.61
SPG11-206ENST00000558093 PTPN1P18031 435 aaKnown RBP5□□□□□ -1.61
SPG11-206ENST00000558093 HOXA5P20719 270 aa5□□□□□ -1.61
SPG11-206ENST00000558093 GJA4P35212 333 aa5□□□□□ -1.61
SPG11-206ENST00000558093 EPHA5P54756 1037 aa5□□□□□ -1.61
SPG11-206ENST00000558093 CTSWP56202 376 aa5□□□□□ -1.61
SPG11-206ENST00000558093 JAM2P57087 298 aa5□□□□□ -1.61
SPG11-206ENST00000558093 SQSTM1Q13501 440 aa5□□□□□ -1.61
SPG11-206ENST00000558093 CD276Q5ZPR3 534 aa5□□□□□ -1.61
SPG11-206ENST00000558093 TRMT10BQ6PF06 316 aaKnown RBP5□□□□□ -1.61
SPG11-206ENST00000558093 FGD2Q7Z6J4 655 aa5□□□□□ -1.61
SPG11-206ENST00000558093 ADAMTS17Q8TE56 1095 aa5□□□□□ -1.61
SPG11-206ENST00000558093 SH3RF2Q8TEC5 729 aa5□□□□□ -1.61
SPG11-206ENST00000558093 KANSL2Q9H9L4 492 aa5□□□□□ -1.61
SPG11-206ENST00000558093 ARHGAP28Q9P2N2 729 aa5□□□□□ -1.61
SPG11-206ENST00000558093 TCRBV5S4A2TA0A5A2 114 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 TCRBV16S1A1N1A0A5B0 115 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 ESYT3A0FGR9 886 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 B4E1Z4 1266 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 ZNF561-AS1K7EIQ3 104 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 MAN2B1O00754 1011 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 OPA1O60313 960 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 HIP1RO75146 1068 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 RANGAP1P46060 587 aaPredicted RBP4.99□□□□□ -1.61
SPG11-206ENST00000558093 GLRBP48167 497 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 SKIDA1Q1XH10 827 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 RGL3Q3MIN7 710 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 FNDC3BQ53EP0 1204 aaKnown RBP4.99□□□□□ -1.61
SPG11-206ENST00000558093 ERICH6BQ5W0A0 696 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 MCTP2Q6DN12 878 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 DDX53Q86TM3 631 aaKnown RBP4.99□□□□□ -1.61
SPG11-206ENST00000558093 FAM124AQ86V42 546 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 ZNF761Q86XN6 746 aaPredicted RBP4.99□□□□□ -1.61
SPG11-206ENST00000558093 HOMER1Q86YM7 354 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 IGSF22Q8N9C0 903 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 SCLYQ96I15 445 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 CELF4Q9BZC1 486 aaKnown RBP4.99□□□□□ -1.61
SPG11-206ENST00000558093 TRIM39Q9HCM9 518 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 TMEM260Q9NX78 707 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 ARHGAP20Q9P2F6 1191 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 FTSJ1Q9UET6 329 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 RAPGEFL1Q9UHV5 662 aa4.99□□□□□ -1.61
SPG11-206ENST00000558093 KCNQ2O43526 872 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 AMY2AP04746 511 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 CKMP06732 381 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 ENO2P09104 434 aaPredicted RBP4.98□□□□□ -1.61
SPG11-206ENST00000558093 ZNF28P17035 718 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 AMY2BP19961 511 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 IGFALSP35858 605 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 FLT3P36888 993 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 PFKPQ01813 784 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 NFIXQ14938 502 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 TCEA2Q15560 299 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 FAM26FQ5R3K3 315 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 PHF19Q5T6S3 580 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 C2orf69Q8N8R5 385 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 DTX3Q8N9I9 347 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 APPBP2Q92624 585 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 RNPC3Q96LT9 517 aaKnown RBP4.98□□□□□ -1.61
SPG11-206ENST00000558093 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 XYLT2Q9H1B5 865 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 ADAM7Q9H2U9 754 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 SMURF1Q9HCE7 757 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 FANCLQ9NW38 375 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 HSPBP1Q9NZL4 362 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 ZFP69BQ9UJL9 534 aa4.98□□□□□ -1.61
SPG11-206ENST00000558093 A0A0G2JLL6 359 aaPredicted RBP4.97□□□□□ -1.61
SPG11-206ENST00000558093 SLC12A8A0AV02 714 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 ZNF839A8K0R7 811 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 ACOT7O00154 380 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 SCDO00767 359 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 PPP1R12AO14974 1030 aaPredicted RBP4.97□□□□□ -1.61
SPG11-206ENST00000558093 CLASP2O75122 1294 aaKnown RBP4.97□□□□□ -1.61
SPG11-206ENST00000558093 KRT37O76014 449 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 NPTXRO95502 500 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 IL13P35225 146 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 TMEM177Q53S58 311 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 PRR31Q5SQ13 230 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 UBXN11Q5T124 520 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 CPZQ66K79 652 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 BORAQ6PGQ7 559 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 LILRA6Q6PI73 481 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 FRMD5Q7Z6J6 570 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 PROSER1Q86XN7 944 aa4.97□□□□□ -1.61
SPG11-206ENST00000558093 SYNPOQ8N3V7 929 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms