RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 GOLIM4O00461 696 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 DLL1O00548 723 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 MGEA5O60502 916 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 LRRN2O75325 713 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 DEAF1O75398 565 aaPredicted RBP4.61□□□□□ -1.67
TDP1-217ENST00000557782 TIAF1O95411 115 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 SRGNP10124 158 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 DRD2P14416 443 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 PTMSP20962 102 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 GRK6P43250 576 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 KIF11P52732 1056 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 KIF23Q02241 960 aaPredicted RBP4.61□□□□□ -1.67
TDP1-217ENST00000557782 DDX10Q13206 875 aaKnown RBP4.61□□□□□ -1.67
TDP1-217ENST00000557782 LSAMPQ13449 338 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 CNGB1Q14028 1251 aaPredicted RBP4.61□□□□□ -1.67
TDP1-217ENST00000557782 GAS6Q14393 721 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 EP400NLQ6ZTU2 488 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 CHSY3Q70JA7 882 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 GPATCH11Q8N954 259 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 DTWD2Q8NBA8 298 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 C2CD4AQ8NCU7 369 aaPredicted RBP4.61□□□□□ -1.67
TDP1-217ENST00000557782 ENOX1Q8TC92 643 aaKnown RBP4.61□□□□□ -1.67
TDP1-217ENST00000557782 MVB12AQ96EY5 273 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 TBATAQ96M53 351 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 ORAI2Q96SN7 254 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 TBCBQ99426 244 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 ELF4Q99607 663 aaPredicted RBP4.61□□□□□ -1.67
TDP1-217ENST00000557782 YIPF2Q9BWQ6 316 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 NUP62CLQ9H1M0 184 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 RSAD1Q9HA92 442 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 SP110Q9HB58 689 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 ACSS2Q9NR19 701 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 FAM105AQ9NUU6 356 aa4.61□□□□□ -1.67
TDP1-217ENST00000557782 ZNF561-AS1K7EIQ3 104 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 ARNTLO00327 626 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 TCERG1O14776 1098 aaKnown RBP4.6□□□□□ -1.67
TDP1-217ENST00000557782 EPB41L2O43491 1005 aaKnown RBP4.6□□□□□ -1.67
TDP1-217ENST00000557782 TLR5O60602 858 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 WISP1O95388 367 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 CYP17A1P05093 508 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 ZBTB48P10074 688 aaPredicted RBP4.6□□□□□ -1.67
TDP1-217ENST00000557782 MTHFD2P13995 350 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 HSD3B1P14060 373 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 PDE6AP16499 860 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 KRT15P19012 456 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 RAB6AP20340 208 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 C5AR1P21730 350 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 ENPP1P22413 925 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 PEX2P28328 305 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 BMP8BP34820 402 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 CTSKP43235 329 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 KIR3DL1P43629 444 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 SLC16A1P53985 500 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 SRSF2Q01130 221 aaKnown RBP4.6□□□□□ -1.67
TDP1-217ENST00000557782 TNFAIP2Q03169 654 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 TBX2Q13207 712 aaPredicted RBP4.6□□□□□ -1.67
TDP1-217ENST00000557782 KCTD2Q14681 263 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 PDCD1Q15116 288 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 GPR19Q15760 415 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 UAP1L1Q3KQV9 507 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 TOR2AQ5JU69 321 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 HYIQ5T013 277 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 ANKRD34AQ69YU3 496 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 HHIPL2Q6UWX4 724 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 LDHAL6AQ6ZMR3 332 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 KIAA1211Q6ZU35 1233 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 USP45Q70EL2 814 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 DPP9Q86TI2 863 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 SLC41A1Q8IVJ1 513 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 CLASRPQ8N2M8 674 aaKnown RBP4.6□□□□□ -1.67
TDP1-217ENST00000557782 DAGLBQ8NCG7 672 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 PPP1R35Q8TAP8 253 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 CDK5RAP3Q96JB5 506 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 TRIM47Q96LD4 638 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 RIPOR3Q96MK2 946 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 KCNJ15Q99712 375 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 ISCA1Q9BUE6 129 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 B3GNT5Q9BYG0 378 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 WDR12Q9GZL7 423 aaKnown RBP4.6□□□□□ -1.67
TDP1-217ENST00000557782 ZNF277Q9NRM2 450 aaPredicted RBP4.6□□□□□ -1.67
TDP1-217ENST00000557782 RTEL1Q9NZ71 1219 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 USP36Q9P275 1121 aaKnown RBP4.6□□□□□ -1.67
TDP1-217ENST00000557782 FNIP2Q9P278 1114 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 PPARGC1AQ9UBK2 798 aaKnown RBP4.6□□□□□ -1.67
TDP1-217ENST00000557782 NRBP1Q9UHY1 535 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 MINPP1Q9UNW1 487 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 POLHQ9Y253 713 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 DAGLAQ9Y4D2 1042 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 IGF1RP08069 1367 aa4.6□□□□□ -1.67
TDP1-217ENST00000557782 SETD1BQ9UPS6 1966 aaKnown RBP4.6□□□□□ -1.67
TDP1-217ENST00000557782 ST8SIA5O15466 376 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 B3GALT2O43825 422 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 NDUFS2O75306 463 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 UBXN7O94888 489 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 GNAT1P11488 350 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 OSMP13725 252 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 NID1P14543 1247 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 PDCP20941 246 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 CHKAP35790 457 aa4.59□□□□□ -1.67
TDP1-217ENST00000557782 MAPK9P45984 424 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms