RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 GCOM1H8Y6P7 765 aaPredicted RBP19.09■□□□□ 0.65
NEK9-211ENST00000557673 ZBTB43O43298 467 aa19.09■□□□□ 0.65
NEK9-211ENST00000557673 CAND2O75155 1236 aa19.09■□□□□ 0.65
NEK9-211ENST00000557673 POLR2MP0CAP2 368 aa19.09■□□□□ 0.65
NEK9-211ENST00000557673 MBTPS1Q14703 1052 aa19.09■□□□□ 0.65
NEK9-211ENST00000557673 TCTN1Q2MV58 587 aa19.09■□□□□ 0.65
NEK9-211ENST00000557673 LEXMQ3ZCV2 418 aa19.09■□□□□ 0.65
NEK9-211ENST00000557673 MYOCDQ8IZQ8 938 aa19.09■□□□□ 0.65
NEK9-211ENST00000557673 CMTR1Q8N1G2 835 aaKnown RBP19.09■□□□□ 0.65
NEK9-211ENST00000557673 DBF4BQ8NFT6 615 aa19.09■□□□□ 0.65
NEK9-211ENST00000557673 ATP6V0A1Q93050 837 aa19.09■□□□□ 0.65
NEK9-211ENST00000557673 WNT8BQ93098 351 aa19.09■□□□□ 0.65
NEK9-211ENST00000557673 GOLGA8AA7E2F4 631 aa19.08■□□□□ 0.64
NEK9-211ENST00000557673 H3BRB1 525 aa19.08■□□□□ 0.64
NEK9-211ENST00000557673 NOP56O00567 594 aaKnown RBP19.08■□□□□ 0.64
NEK9-211ENST00000557673 GNAT1P11488 350 aa19.08■□□□□ 0.64
NEK9-211ENST00000557673 UBA1P22314 1058 aaKnown RBP19.08■□□□□ 0.64
NEK9-211ENST00000557673 EVCP57679 992 aa19.08■□□□□ 0.64
NEK9-211ENST00000557673 HTRA4P83105 476 aaPredicted RBP19.08■□□□□ 0.64
NEK9-211ENST00000557673 PUS10Q3MIT2 529 aaKnown RBP19.08■□□□□ 0.64
NEK9-211ENST00000557673 GNPTABQ3T906 1256 aa19.08■□□□□ 0.64
NEK9-211ENST00000557673 SYNE3Q6ZMZ3 975 aa19.08■□□□□ 0.64
NEK9-211ENST00000557673 SRBD1Q8N5C6 995 aaKnown RBP19.08■□□□□ 0.64
NEK9-211ENST00000557673 SEPT8Q92599 483 aa19.08■□□□□ 0.64
NEK9-211ENST00000557673 RRP36Q96EU6 259 aaKnown RBP19.08■□□□□ 0.64
NEK9-211ENST00000557673 LZTS2Q9BRK4 669 aa19.08■□□□□ 0.64
NEK9-211ENST00000557673 C16orf70Q9BSU1 422 aa19.08■□□□□ 0.64
NEK9-211ENST00000557673 TUT1Q9H6E5 874 aaKnown RBP19.08■□□□□ 0.64
NEK9-211ENST00000557673 PTPRSQ13332 1948 aa19.08■□□□□ 0.64
NEK9-211ENST00000557673 PI4K2BG5E9Z4 385 aa19.07■□□□□ 0.64
NEK9-211ENST00000557673 STAM2O75886 525 aa19.07■□□□□ 0.64
NEK9-211ENST00000557673 KCNA5P22460 613 aa19.07■□□□□ 0.64
NEK9-211ENST00000557673 GNAQP50148 359 aa19.07■□□□□ 0.64
NEK9-211ENST00000557673 SP2Q02086 613 aa19.07■□□□□ 0.64
NEK9-211ENST00000557673 RTN1Q16799 776 aa19.07■□□□□ 0.64
NEK9-211ENST00000557673 PLEKHG4Q58EX7 1191 aa19.07■□□□□ 0.64
NEK9-211ENST00000557673 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.07■□□□□ 0.64
NEK9-211ENST00000557673 TMTC3Q6ZXV5 915 aa19.07■□□□□ 0.64
NEK9-211ENST00000557673 FCHSD1Q86WN1 690 aa19.07■□□□□ 0.64
NEK9-211ENST00000557673 IL31RAQ8NI17 732 aa19.07■□□□□ 0.64
NEK9-211ENST00000557673 MRPL38Q96DV4 380 aaKnown RBP19.07■□□□□ 0.64
NEK9-211ENST00000557673 COL4A4P53420 1690 aaPredicted RBP19.07■□□□□ 0.64
NEK9-211ENST00000557673 BRWD1Q9NSI6 2320 aa19.07■□□□□ 0.64
NEK9-211ENST00000557673 SORBS3O60504 671 aa19.06■□□□□ 0.64
NEK9-211ENST00000557673 SMARCA1P28370 1054 aa19.06■□□□□ 0.64
NEK9-211ENST00000557673 METAP2P50579 478 aaKnown RBP eCLIP19.06■□□□□ 0.64
NEK9-211ENST00000557673 NEDD9Q14511 834 aa19.06■□□□□ 0.64
NEK9-211ENST00000557673 TIGD5Q53EQ6 642 aa19.06■□□□□ 0.64
NEK9-211ENST00000557673 GJD3Q8N144 294 aa19.06■□□□□ 0.64
NEK9-211ENST00000557673 FANCBQ8NB91 859 aa19.06■□□□□ 0.64
NEK9-211ENST00000557673 SP7Q8TDD2 431 aaPredicted RBP19.06■□□□□ 0.64
NEK9-211ENST00000557673 YME1L1Q96TA2 773 aa19.06■□□□□ 0.64
NEK9-211ENST00000557673 C17orf80Q9BSJ5 609 aa19.06■□□□□ 0.64
NEK9-211ENST00000557673 RBM28Q9NW13 759 aaKnown RBP19.06■□□□□ 0.64
NEK9-211ENST00000557673 SEC63Q9UGP8 760 aaKnown RBP19.06■□□□□ 0.64
NEK9-211ENST00000557673 NAP1L2Q9ULW6 460 aaPredicted RBP19.06■□□□□ 0.64
NEK9-211ENST00000557673 MYH7BA7E2Y1 1941 aa19.06■□□□□ 0.64
NEK9-211ENST00000557673 CNTNAP5Q8WYK1 1306 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 hCG_1642624A0A1W2PR95 340 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 LGALS2P05162 132 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 SMIM10L2AP0DMW4 78 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 SMIM10L2BP0DMW5 78 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 HOXC8P31273 242 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 HOXD11P31277 338 aaPredicted RBP19.05■□□□□ 0.64
NEK9-211ENST00000557673 NEK4P51957 841 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 AK2P54819 239 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 MKRN4PQ13434 485 aaPredicted RBP19.05■□□□□ 0.64
NEK9-211ENST00000557673 HIC1Q14526 733 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 EPC2Q52LR7 807 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 FAM178BQ8IXR5 827 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 CCDC82Q8N4S0 544 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 APBB2Q92870 758 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 TOP1MTQ969P6 601 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 ZFP91Q96JP5 570 aaPredicted RBP19.05■□□□□ 0.64
NEK9-211ENST00000557673 ZNF215Q9UL58 517 aaPredicted RBP19.05■□□□□ 0.64
NEK9-211ENST00000557673 FAM50BQ9Y247 325 aa19.05■□□□□ 0.64
NEK9-211ENST00000557673 ANKRD1Q15327 319 aa19.04■□□□□ 0.64
NEK9-211ENST00000557673 PTCRAQ6ISU1 281 aaPredicted RBP19.04■□□□□ 0.64
NEK9-211ENST00000557673 METTL7BQ6UX53 244 aa19.04■□□□□ 0.64
NEK9-211ENST00000557673 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.04■□□□□ 0.64
NEK9-211ENST00000557673 RNPEPQ9H4A4 650 aa19.04■□□□□ 0.64
NEK9-211ENST00000557673 FAM217BQ9NTX9 383 aaPredicted RBP19.04■□□□□ 0.64
NEK9-211ENST00000557673 SIP14410 1827 aa19.03■□□□□ 0.64
NEK9-211ENST00000557673 H3BNC9 293 aa19.03■□□□□ 0.64
NEK9-211ENST00000557673 TREHO43280 583 aa19.03■□□□□ 0.64
NEK9-211ENST00000557673 ALADP13716 330 aa19.03■□□□□ 0.64
NEK9-211ENST00000557673 PDIA3P30101 505 aaKnown RBP19.03■□□□□ 0.64
NEK9-211ENST00000557673 CDC27P30260 824 aa19.03■□□□□ 0.64
NEK9-211ENST00000557673 SSTR3P32745 418 aaPredicted RBP19.03■□□□□ 0.64
NEK9-211ENST00000557673 ICAM3P32942 547 aa19.03■□□□□ 0.64
NEK9-211ENST00000557673 RABEP1Q15276 862 aa19.03■□□□□ 0.64
NEK9-211ENST00000557673 KHSRPQ92945 711 aaKnown RBP eCLIP19.03■□□□□ 0.64
NEK9-211ENST00000557673 INPP4AQ96PE3 977 aaPredicted RBP19.03■□□□□ 0.64
NEK9-211ENST00000557673 LARP6Q9BRS8 491 aaKnown RBP19.03■□□□□ 0.64
NEK9-211ENST00000557673 SPATA31C2B4DYI2 1134 aa19.02■□□□□ 0.64
NEK9-211ENST00000557673 FIBPO43427 364 aa19.02■□□□□ 0.64
NEK9-211ENST00000557673 FUT2Q10981 343 aa19.02■□□□□ 0.64
NEK9-211ENST00000557673 GPM6BQ13491 265 aa19.02■□□□□ 0.64
NEK9-211ENST00000557673 USP17L6PQ6QN14 398 aa19.02■□□□□ 0.64
NEK9-211ENST00000557673 BANK1Q8NDB2 785 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms