RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 PAN2Q504Q3 1202 aaKnown RBP15.62■□□□□ 0.09
TMEM260-215ENST00000557626 CCDC8Q9H0W5 538 aaPredicted RBP15.62■□□□□ 0.09
TMEM260-215ENST00000557626 CYP26B1Q9NR63 512 aa15.62■□□□□ 0.09
TMEM260-215ENST00000557626 SMG5Q9UPR3 1016 aaKnown RBP15.62■□□□□ 0.09
TMEM260-215ENST00000557626 C17orf102A2RUQ5 167 aa15.61■□□□□ 0.09
TMEM260-215ENST00000557626 B4DLN1 442 aa15.61■□□□□ 0.09
TMEM260-215ENST00000557626 MBD4O95243 580 aa15.61■□□□□ 0.09
TMEM260-215ENST00000557626 ICAM1P05362 532 aa15.61■□□□□ 0.09
TMEM260-215ENST00000557626 CENPBP07199 599 aaPredicted RBP15.61■□□□□ 0.09
TMEM260-215ENST00000557626 DCNP07585 359 aaKnown RBP15.61■□□□□ 0.09
TMEM260-215ENST00000557626 TGM1P22735 817 aa15.61■□□□□ 0.09
TMEM260-215ENST00000557626 MRPL12P52815 198 aaKnown RBP15.61■□□□□ 0.09
TMEM260-215ENST00000557626 TTF1Q15361 905 aaPredicted RBP15.61■□□□□ 0.09
TMEM260-215ENST00000557626 PDE12Q6L8Q7 609 aaKnown RBP15.61■□□□□ 0.09
TMEM260-215ENST00000557626 ARHGAP45Q92619 1136 aa15.61■□□□□ 0.09
TMEM260-215ENST00000557626 FRAT1Q92837 279 aaPredicted RBP15.61■□□□□ 0.09
TMEM260-215ENST00000557626 CASP10Q92851 521 aa15.61■□□□□ 0.09
TMEM260-215ENST00000557626 CHMP4CQ96CF2 233 aa15.61■□□□□ 0.09
TMEM260-215ENST00000557626 TBC1D17Q9HA65 648 aa15.61■□□□□ 0.09
TMEM260-215ENST00000557626 MKNK2Q9HBH9 465 aa15.61■□□□□ 0.09
TMEM260-215ENST00000557626 DBR1Q9UK59 544 aaKnown RBP15.61■□□□□ 0.09
TMEM260-215ENST00000557626 USTQ9Y2C2 406 aa15.61■□□□□ 0.09
TMEM260-215ENST00000557626 IGKV6D-41A0A0C4DH26 115 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 PNMA6EA0A0J9YXQ4 647 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 TTLL1O95922 423 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 SLC1A4P43007 532 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 ERVFC1P60507 584 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 PLPP4Q5VZY2 271 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 CTR9Q6PD62 1173 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 SEPT14Q6ZU15 432 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 DNERQ8NFT8 737 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 CEP95Q96GE4 821 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 PARD6AQ9NPB6 346 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 LHX6Q9UPM6 363 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 KIAA1217Q5T5P2 1943 aa15.6■□□□□ 0.09
TMEM260-215ENST00000557626 ITPR1Q14643 2758 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 TCRBV5S4A2TA0A5A2 114 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 KRBA1A5PL33 1030 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 ENPP3O14638 875 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 WEE2P0C1S8 567 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 ZKSCAN2Q63HK3 967 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 RNF207Q6ZRF8 634 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 STK11IPQ8N1F8 1099 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 ATRIPQ8WXE1 791 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 MTMR4Q9NYA4 1195 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 GMEB2Q9UKD1 530 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 PRR12Q9ULL5 1215 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 PCDHB12Q9Y5F1 795 aa15.59■□□□□ 0.09
TMEM260-215ENST00000557626 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.58■□□□□ 0.08
TMEM260-215ENST00000557626 FSCN2O14926 492 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 TREHO43280 583 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 PLA2G6O60733 806 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 EOMESO95936 686 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 CFHP08603 1231 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 GHRP10912 638 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 UNQ6494/PRO21346Q6UXR6 183 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 PPTC7Q8NI37 304 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 PANK1Q8TE04 598 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 DDX1Q92499 740 aaKnown RBP15.58■□□□□ 0.08
TMEM260-215ENST00000557626 CLUAP1Q96AJ1 413 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 GMCL1Q96IK5 515 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 IGSF5Q9NSI5 407 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 DLGAP2Q9P1A6 1054 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 WNT16Q9UBV4 365 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 SIT1Q9Y3P8 196 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 PCDHGA2Q9Y5H1 932 aa15.58■□□□□ 0.08
TMEM260-215ENST00000557626 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.58■□□□□ 0.08
TMEM260-215ENST00000557626 DENND4AQ7Z401 1863 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 POTEMA6NI47 508 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 C1QTNF9BB2RNN3 333 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 C1QTNF9P0C862 333 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 RING1Q06587 406 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 ZNF528Q3MIS6 628 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 SPOUT1Q5T280 376 aaKnown RBP15.57■□□□□ 0.08
TMEM260-215ENST00000557626 N4BP2L1Q5TBK1 243 aaPredicted RBP15.57■□□□□ 0.08
TMEM260-215ENST00000557626 XRRA1Q6P2D8 792 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 POTEGQ6S5H5 508 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 RUFY4Q6ZNE9 571 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 KCTD1Q719H9 257 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 EMID1Q96A84 441 aaPredicted RBP15.57■□□□□ 0.08
TMEM260-215ENST00000557626 ACSF2Q96CM8 615 aaPredicted RBP15.57■□□□□ 0.08
TMEM260-215ENST00000557626 TMEM260Q9NX78 707 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 ARPP21Q9UBL0 812 aaPredicted RBP15.57■□□□□ 0.08
TMEM260-215ENST00000557626 CA14Q9ULX7 337 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 DMXL2Q8TDJ6 3036 aa15.57■□□□□ 0.08
TMEM260-215ENST00000557626 NARSO43776 548 aaKnown RBP15.56■□□□□ 0.08
TMEM260-215ENST00000557626 FGF18O76093 207 aa15.56■□□□□ 0.08
TMEM260-215ENST00000557626 MCCP23508 829 aa15.56■□□□□ 0.08
TMEM260-215ENST00000557626 RPS6P62753 249 aaKnown RBP15.56■□□□□ 0.08
TMEM260-215ENST00000557626 KIAA1841Q6NSI8 718 aa15.56■□□□□ 0.08
TMEM260-215ENST00000557626 MAML2Q8IZL2 1156 aaPredicted RBP15.56■□□□□ 0.08
TMEM260-215ENST00000557626 API5Q9BZZ5 524 aaKnown RBP15.56■□□□□ 0.08
TMEM260-215ENST00000557626 EPC1Q9H2F5 836 aa15.56■□□□□ 0.08
TMEM260-215ENST00000557626 KCNK12Q9HB15 430 aa15.56■□□□□ 0.08
TMEM260-215ENST00000557626 ENTPD7Q9NQZ7 604 aa15.56■□□□□ 0.08
TMEM260-215ENST00000557626 AAASQ9NRG9 546 aa15.56■□□□□ 0.08
TMEM260-215ENST00000557626 IPO8O15397 1037 aaKnown RBP15.55■□□□□ 0.08
TMEM260-215ENST00000557626 HOXC8P31273 242 aa15.55■□□□□ 0.08
TMEM260-215ENST00000557626 APOBRQ0VD83 1088 aa15.55■□□□□ 0.08
TMEM260-215ENST00000557626 LAMC2Q13753 1193 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms