RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ASPNQ9BXN1 380 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 GSX1Q9H4S2 264 aaPredicted RBP6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 GOLGA6AQ9NYA3 693 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 IP6K2Q9UHH9 426 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 SF3B6Q9Y3B4 125 aaKnown RBP6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 PCDHA8Q9Y5H6 950 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 NRAPQ86VF7 1730 aa6.28□□□□□ -1.4
MTHFD1-216ENST00000557539 CEP290O15078 2479 aa6.27□□□□□ -1.4
MTHFD1-216ENST00000557539 ATRXP46100 2492 aa6.27□□□□□ -1.4
MTHFD1-216ENST00000557539 TNRC6CQ9HCJ0 1690 aaKnown RBP6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 CREB3O43889 395 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 LRRN2O75325 713 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 GLRX3O76003 335 aaKnown RBP6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 TIAF1O95411 115 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 ITIH2P19823 946 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 ETV3P41162 512 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 ADCYAP1R1P41586 468 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 CYP4F3Q08477 520 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 SCRN1Q12765 414 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 DEFB115Q30KQ5 88 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 NXNQ6DKJ4 435 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 DENND5AQ6IQ26 1287 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 FDX2Q6P4F2 183 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 KRT28Q7Z3Y7 464 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 NBPF11Q86T75 865 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 MAGEB6Q8N7X4 407 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 RNF141Q8WVD5 230 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 FBXL18Q96ME1 805 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 GPR101Q96P66 508 aaPredicted RBP6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 RHOBTB2Q9BYZ6 727 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 LUC7LQ9NQ29 371 aaKnown RBP6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 CHST12Q9NRB3 414 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 RAXQ9Y2V3 346 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 PIK3R4Q99570 1358 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 KIF15Q9NS87 1388 aa6.27□□□□□ -1.41
MTHFD1-216ENST00000557539 SPATA31A3Q5VYP0 1347 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 KRTAP9-6A0A140TA67 174 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 MEIS1O00470 390 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 GAS7O60861 476 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 RFPL1O75677 317 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 ABLIM3O94929 683 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 SLITRK5O94991 958 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 FKBP9O95302 570 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 CT47B1P0C2W7 299 aaPredicted RBP6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 MYBL2P10244 700 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 RAB6AP20340 208 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 CCND1P24385 295 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 TCIRG1Q13488 830 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 IDI1Q13907 227 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 GFOD2Q3B7J2 385 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 TSHZ1Q6ZSZ6 1077 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 FKBP9P1Q75LS8 142 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 KIF18BQ86Y91 864 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 ZC3H7AQ8IWR0 971 aaKnown RBP6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 PPIL6Q8IXY8 311 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 IGSF22Q8N9C0 903 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 C2CD4AQ8NCU7 369 aaPredicted RBP6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 KREMEN2Q8NCW0 462 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 FAM46AQ96IP4 442 aaKnown RBP6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 PHF20Q9BVI0 1012 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 LGR6Q9HBX8 967 aa6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 LUC7L2Q9Y383 392 aaKnown RBP6.26□□□□□ -1.41
MTHFD1-216ENST00000557539 ANKRD11Q6UB99 2663 aaPredicted RBP6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 COL24A1Q17RW2 1714 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 LAMA2P24043 3122 aaKnown RBP6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 H0Y8X5 98 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 RBAK-RBAKDNI3L0D1 243 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 CBX4O00257 560 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 MED26O95402 600 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 LDHAP00338 332 aaKnown RBP6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 F2P00734 622 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 NAT1P18440 290 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 DSG1Q02413 1049 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 ATP13A4Q4VNC1 1196 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 TMED8Q6PL24 325 aaPredicted RBP6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 TMC3Q7Z5M5 1100 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 SLC51AQ86UW1 340 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 SAMD3Q8N6K7 520 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 ORAI3Q9BRQ5 295 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 THG1LQ9NWX6 298 aaKnown RBP6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 MINPP1Q9UNW1 487 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 ZKSCAN5Q9Y2L8 839 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 DAGLAQ9Y4D2 1042 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 PTPRUQ92729 1446 aa6.25□□□□□ -1.41
MTHFD1-216ENST00000557539 CACNA1BQ00975 2339 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 WDR64B1ANS9 1081 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 STXBP3O00186 592 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 MT-CO1P00395 513 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 THBDP07204 575 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 SRGAP2CP0DJJ0 459 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 IARSP41252 1262 aaKnown RBP6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 GPR85P60893 370 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 SAFB2Q14151 953 aaKnown RBP eCLIP6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 HDGFL2Q7Z4V5 671 aaPredicted RBP6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 TPH2Q8IWU9 490 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 IFNL3Q8IZI9 196 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 SLC39A13Q96H72 371 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 FUBP3Q96I24 572 aaKnown RBP eCLIP6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 MENTQ9BUN1 341 aa6.24□□□□□ -1.41
MTHFD1-216ENST00000557539 CABP5Q9NP86 173 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms