RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 CEP55Q53EZ4 464 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 ZNF618Q5T7W0 954 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 REXO1Q8N1G1 1221 aaKnown RBP18.88■□□□□ 0.61
VSX1-207ENST00000557285 GLG1Q92896 1179 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 SDF4Q9BRK5 362 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 RNF26Q9BY78 433 aaPredicted RBP18.88■□□□□ 0.61
VSX1-207ENST00000557285 ZMYND12Q9H0C1 365 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 NKX2-4Q9H2Z4 354 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 RNPEPQ9H4A4 650 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 JPH1Q9HDC5 661 aaPredicted RBP18.88■□□□□ 0.61
VSX1-207ENST00000557285 MSRAQ9UJ68 235 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 EYSQ5T1H1 3165 aa18.88■□□□□ 0.61
VSX1-207ENST00000557285 GSTTP1A0A1W2PQM5 241 aa18.87■□□□□ 0.61
VSX1-207ENST00000557285 DTNBO60941 627 aa18.87■□□□□ 0.61
VSX1-207ENST00000557285 MYOGP15173 224 aa18.87■□□□□ 0.61
VSX1-207ENST00000557285 ATP2A2P16615 1042 aaKnown RBP18.87■□□□□ 0.61
VSX1-207ENST00000557285 EVCP57679 992 aa18.87■□□□□ 0.61
VSX1-207ENST00000557285 TRIM22Q8IYM9 498 aa18.87■□□□□ 0.61
VSX1-207ENST00000557285 SEPT1Q8WYJ6 367 aa18.87■□□□□ 0.61
VSX1-207ENST00000557285 ZNF576Q9H609 170 aa18.87■□□□□ 0.61
VSX1-207ENST00000557285 AGO4Q9HCK5 861 aaKnown RBP18.87■□□□□ 0.61
VSX1-207ENST00000557285 ESYT2A0FGR8 921 aa18.86■□□□□ 0.61
VSX1-207ENST00000557285 NBNO60934 754 aa18.86■□□□□ 0.61
VSX1-207ENST00000557285 CTSHP09668 335 aa18.86■□□□□ 0.61
VSX1-207ENST00000557285 GNA11P29992 359 aa18.86■□□□□ 0.61
VSX1-207ENST00000557285 NLRP5P59047 1200 aa18.86■□□□□ 0.61
VSX1-207ENST00000557285 GRIN2CQ14957 1233 aa18.86■□□□□ 0.61
VSX1-207ENST00000557285 TRIM71Q2Q1W2 868 aaKnown RBP18.86■□□□□ 0.61
VSX1-207ENST00000557285 SERINC5Q86VE9 423 aa18.86■□□□□ 0.61
VSX1-207ENST00000557285 PLA2G4DQ86XP0 818 aa18.86■□□□□ 0.61
VSX1-207ENST00000557285 CCDC148Q8NFR7 591 aa18.86■□□□□ 0.61
VSX1-207ENST00000557285 ZNF274Q96GC6 653 aaPredicted RBP18.86■□□□□ 0.61
VSX1-207ENST00000557285 SLC9A2Q9UBY0 812 aa18.86■□□□□ 0.61
VSX1-207ENST00000557285 YBX2Q9Y2T7 364 aaKnown RBP18.86■□□□□ 0.61
VSX1-207ENST00000557285 FAM86B1E9PN63 330 aa18.85■□□□□ 0.61
VSX1-207ENST00000557285 MAFGO15525 162 aa18.85■□□□□ 0.61
VSX1-207ENST00000557285 FAM86B2P0C5J1 330 aa18.85■□□□□ 0.61
VSX1-207ENST00000557285 GNAT1P11488 350 aa18.85■□□□□ 0.61
VSX1-207ENST00000557285 FOSL2P15408 326 aa18.85■□□□□ 0.61
VSX1-207ENST00000557285 ITGB3BPQ13352 177 aaPredicted RBP18.85■□□□□ 0.61
VSX1-207ENST00000557285 GPNMBQ14956 572 aa18.85■□□□□ 0.61
VSX1-207ENST00000557285 RAB30Q15771 203 aa18.85■□□□□ 0.61
VSX1-207ENST00000557285 LMBR1Q8WVP7 490 aa18.85■□□□□ 0.61
VSX1-207ENST00000557285 MYO9BQ13459 2157 aa18.85■□□□□ 0.61
VSX1-207ENST00000557285 TMEM265A0A087WTH1 108 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 MEIS1O00470 390 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 ACTR2P61160 394 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 IGBP1P78318 339 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 RBL2Q08999 1139 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 PPFIA1Q13136 1202 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 TCTN1Q2MV58 587 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 CPLX2Q6PUV4 134 aaKnown RBP18.84■□□□□ 0.61
VSX1-207ENST00000557285 TEX2Q8IWB9 1127 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 SLC17A8Q8NDX2 589 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 BICD2Q8TD16 824 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 AIFM3Q96NN9 605 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 SMARCAD1Q9H4L7 1026 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 ERAP1Q9NZ08 941 aa18.84■□□□□ 0.61
VSX1-207ENST00000557285 RSPH10B2B2RC85 870 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 SEC24BO95487 1268 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 RSPH10BP0C881 870 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 HOXC8P31273 242 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 KCNJ6P48051 423 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 SCRN1Q12765 414 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 MBTPS1Q14703 1052 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 TRAF7Q6Q0C0 670 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 TMCO2Q7Z6W1 182 aaPredicted RBP18.83■□□□□ 0.6
VSX1-207ENST00000557285 ZBTB10Q96DT7 871 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 SLKQ9H2G2 1235 aaPredicted RBP18.83■□□□□ 0.6
VSX1-207ENST00000557285 AZI2Q9H6S1 392 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 SLC28A3Q9HAS3 691 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 TPCN1Q9ULQ1 816 aa18.83■□□□□ 0.6
VSX1-207ENST00000557285 NFASCO94856 1347 aa18.82■□□□□ 0.6
VSX1-207ENST00000557285 AK2P54819 239 aa18.82■□□□□ 0.6
VSX1-207ENST00000557285 GRIK4Q16099 956 aa18.82■□□□□ 0.6
VSX1-207ENST00000557285 PRR16Q569H4 304 aa18.82■□□□□ 0.6
VSX1-207ENST00000557285 PPP2R2DQ66LE6 453 aa18.82■□□□□ 0.6
VSX1-207ENST00000557285 CNKSR3Q6P9H4 555 aa18.82■□□□□ 0.6
VSX1-207ENST00000557285 RUFY4Q6ZNE9 571 aa18.82■□□□□ 0.6
VSX1-207ENST00000557285 PCYT2Q99447 389 aa18.82■□□□□ 0.6
VSX1-207ENST00000557285 PRDM12Q9H4Q4 367 aa18.82■□□□□ 0.6
VSX1-207ENST00000557285 TRPC6Q9Y210 931 aa18.82■□□□□ 0.6
VSX1-207ENST00000557285 PTPRSQ13332 1948 aa18.82■□□□□ 0.6
VSX1-207ENST00000557285 EMSYQ7Z589 1322 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 NRCAMQ92823 1304 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 BACH1O14867 736 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 BAIAP3O94812 1187 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 DEXIO95424 95 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 PARNO95453 639 aaKnown RBP18.81■□□□□ 0.6
VSX1-207ENST00000557285 CXCL10P02778 98 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 CYP3A4P08684 503 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 ANAPC15P60006 121 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 WDR5P61964 334 aaKnown RBP18.81■□□□□ 0.6
VSX1-207ENST00000557285 DEFB103AP81534 67 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 MCTP2Q6DN12 878 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 NIPA1Q7RTP0 329 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 MAFAQ8NHW3 353 aaPredicted RBP18.81■□□□□ 0.6
VSX1-207ENST00000557285 SLC9A7Q96T83 725 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 ZNF577Q9BSK1 485 aa18.81■□□□□ 0.6
VSX1-207ENST00000557285 PCDHA11Q9Y5I1 949 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms