RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 EPC2Q52LR7 807 aa12.35□□□□□ -0.43
HNRNPC-230ENST00000557201 XRRA1Q6P2D8 792 aa12.35□□□□□ -0.43
HNRNPC-230ENST00000557201 USP17L6PQ6QN14 398 aa12.35□□□□□ -0.43
HNRNPC-230ENST00000557201 RALYLQ86SE5 291 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-230ENST00000557201 RPAINQ86UA6 219 aa12.35□□□□□ -0.43
HNRNPC-230ENST00000557201 LMBR1Q8WVP7 490 aa12.35□□□□□ -0.43
HNRNPC-230ENST00000557201 SEPT8Q92599 483 aa12.35□□□□□ -0.43
HNRNPC-230ENST00000557201 MRPL38Q96DV4 380 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-230ENST00000557201 LY9Q9HBG7 655 aa12.35□□□□□ -0.43
HNRNPC-230ENST00000557201 H3BNC9 293 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 EPB41L2O43491 1005 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 GPR37L1O60883 481 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 CHRNA1P02708 482 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 CTSHP09668 335 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 LINC00271P0C7V0 271 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 GNAT1P11488 350 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 COL9A3Q14050 684 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 SART3Q15020 963 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 CATIPQ7Z7H3 387 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 FAM178BQ8IXR5 827 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 NEK9Q8TD19 979 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 SAMD11Q96NU1 681 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 MTA3Q9BTC8 594 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 LSG1Q9H089 658 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 DOCK5Q9H7D0 1870 aa12.34□□□□□ -0.43
HNRNPC-230ENST00000557201 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 ATP9AO75110 1047 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 DDAH1O94760 285 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 REC8O95072 547 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 KCNA2P16389 499 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 KCNA5P22460 613 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 TMEM31Q5JXX7 168 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 TMEM192Q8IY95 271 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 ZNF654Q8IZM8 581 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 SRBD1Q8N5C6 995 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 PIBF1Q8WXW3 757 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 APBB2Q92870 758 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 YME1L1Q96TA2 773 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 MYL10Q9BUA6 226 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 EHMT1Q9H9B1 1298 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 RC3H2Q9HBD1 1191 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 NRCAMQ92823 1304 aa12.33□□□□□ -0.44
HNRNPC-230ENST00000557201 GSTTP1A0A1W2PQM5 241 aa12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 GRXCR2A6NFK2 248 aa12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 PLEKHA8P1O95397 391 aa12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 ITGB5P18084 799 aa12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 ARHGAP4P98171 946 aa12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 MGAT3Q09327 533 aa12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 PTPROQ16827 1216 aa12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 UTP14CQ5TAP6 766 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 RUFY4Q6ZNE9 571 aa12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 FAM122AQ96E09 287 aa12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 RRP36Q96EU6 259 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 LZTS2Q9BRK4 669 aa12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 IFIH1Q9BYX4 1025 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 ANO2Q9NQ90 1003 aa12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 ZNF215Q9UL58 517 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 RBM8AQ9Y5S9 174 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-230ENST00000557201 MBLAC1A4D2B0 266 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 C5orf67F2Z3F1 127 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 UPP2O95045 317 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 IL9P15248 144 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 KIF5BP33176 963 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 TCF7P36402 384 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 VASPP50552 380 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 GPM6BQ13491 265 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 TIGD5Q53EQ6 642 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 TCEAL5Q5H9L2 206 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 MARCH8Q5T0T0 291 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 TAF2Q6P1X5 1199 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 NLRX1Q86UT6 975 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 GJD3Q8N144 294 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 GIMAP8Q8ND71 665 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 BANK1Q8NDB2 785 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 CTCFLQ8NI51 663 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 GPRASP2Q96D09 838 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 UBIAD1Q9Y5Z9 338 aa12.31□□□□□ -0.44
HNRNPC-230ENST00000557201 SH2B2O14492 632 aaPredicted RBP12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 SP4Q02446 784 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 LPIN1Q14693 890 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 NECTIN1Q15223 517 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 PTCRAQ6ISU1 281 aaPredicted RBP12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 CRIPAKQ8N1N5 446 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 CUL5Q93034 780 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 PABPC5Q96DU9 382 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 IL17RAQ96F46 866 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 RALGAPA2Q2PPJ7 1873 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 FAM86C2PA6NEL3 165 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 ENPP3O14638 875 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 PRC1O43663 620 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 RB1P06400 928 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 GHRP10912 638 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 LTBRP36941 435 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 LIFRP42702 1097 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 GNAQP50148 359 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 CTC1Q2NKJ3 1217 aa12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 PUS10Q3MIT2 529 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-230ENST00000557201 C8orf34Q49A92 452 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms