RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 GCOM1H8Y6P7 765 aaPredicted RBP16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 EXOC3O60645 756 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 POLR2MP0CAP2 368 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 FXR2P51116 673 aaKnown RBP eCLIP16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 BRD3Q15059 726 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 EXOC3L4Q17RC7 722 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 NAA35Q5VZE5 725 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 TRIM58Q8NG06 486 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 REEP2Q9BRK0 252 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 STK32BQ9NY57 414 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 ARHGAP20Q9P2F6 1191 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 PRR12Q9ULL5 1215 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 HYOU1Q9Y4L1 999 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 SLC9A1P19634 815 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 GUCY2FP51841 1108 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 KCNA1Q09470 495 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 ZFYVE27Q5T4F4 411 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 STRIP1Q5VSL9 837 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 PRAMEF18Q5VWM3 479 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 TTC19Q6DKK2 380 aaPredicted RBP16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 CENPPQ6IPU0 288 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 FAM178BQ8IXR5 827 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 DYDC2Q96IM9 177 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 DNAJC18Q9H819 358 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 BCCIPQ9P287 314 aaKnown RBP eCLIP16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 GABPAQ06546 454 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 CASP8Q14790 479 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 VPS36Q86VN1 386 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 CDAN1Q8IWY9 1227 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 RETREG2Q8NC44 543 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 COG1Q8WTW3 980 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 KCND1Q9NSA2 647 aa16.87■□□□□ 0.29
TMEM55B-207ENST00000557041 FAM86B1E9PN63 330 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 hCG_1984214I3L0E3 225 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 CEP104O60308 925 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 FAM86B2P0C5J1 330 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 GJB7Q6PEY0 223 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 ZNF713Q8N859 430 aaPredicted RBP16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 U2AF1L4Q8WU68 220 aaKnown RBP16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 ZNF577Q9BSK1 485 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 CCPG1Q9ULG6 757 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 ESYT2A0FGR8 921 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 TESPA1A2RU30 521 aaPredicted RBP16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 CYP11B2P19099 503 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 CASP5P51878 434 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 C8orf74Q6P047 294 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 ZNF507Q8TCN5 953 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 CCDC169A6NNP5 214 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 KCNK3O14649 394 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 RPL13P26373 211 aaKnown RBP16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 TSGA10Q9BZW7 698 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 FAM107BQ9H098 131 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 ABCB11O95342 1321 aa16.86■□□□□ 0.29
TMEM55B-207ENST00000557041 PAPPAQ13219 1627 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 GFPT2O94808 682 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 EIF2AK2P19525 551 aaKnown RBP16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 MIIPQ5JXC2 388 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 CCDC170Q8IYT3 715 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 DNAJC7Q99615 494 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 PDGFDQ9GZP0 370 aaPredicted RBP16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 GLT8D2Q9H1C3 349 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 CASP4P49662 377 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 TNIP1Q15025 636 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 EZH2Q15910 746 aaKnown RBP16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 JDP2Q8WYK2 163 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 ZDHHC15Q96MV8 337 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 CEP89Q96ST8 783 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 EIF2AK1Q9BQI3 630 aaKnown RBP16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 ZNF341Q9BYN7 854 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 ANKZF1Q9H8Y5 726 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 SNED1Q8TER0 1413 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 C4AP0C0L4 1744 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 C4BP0C0L5 1744 aa16.85■□□□□ 0.29
TMEM55B-207ENST00000557041 A0A1W2PRG0 241 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 ANKRD65E5RJM6 399 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 TRIM49P0CI25 452 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 TRIM49CP0CI26 452 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 CCDC127Q96BQ5 260 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 GOPCQ9HD26 462 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 NHSL1Q5SYE7 1610 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 DCAF4Q8WV16 495 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 MYO1AQ9UBC5 1043 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 EIF3CLB5ME19 914 aaKnown RBP16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 CALUO43852 315 aaPredicted RBP16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 FLOT1O75955 427 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 DACT2Q5SW24 774 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 PPP4R3AQ6IN85 833 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 EIF3CQ99613 913 aaKnown RBP16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 GCNT4Q9P109 453 aa16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 ATF5Q9Y2D1 282 aaPredicted RBP16.84■□□□□ 0.29
TMEM55B-207ENST00000557041 PALMO75781 387 aa16.83■□□□□ 0.29
TMEM55B-207ENST00000557041 DGKZQ13574 1117 aa16.83■□□□□ 0.29
TMEM55B-207ENST00000557041 RSRC2Q7L4I2 434 aaKnown RBP16.83■□□□□ 0.29
TMEM55B-207ENST00000557041 SH3BP5LQ7L8J4 393 aa16.83■□□□□ 0.29
TMEM55B-207ENST00000557041 MAATS1Q7Z4T9 603 aa16.83■□□□□ 0.29
TMEM55B-207ENST00000557041 CHURC1Q8WUH1 139 aa16.83■□□□□ 0.29
TMEM55B-207ENST00000557041 SCFD1Q8WVM8 642 aa16.83■□□□□ 0.29
TMEM55B-207ENST00000557041 NAP1L4Q99733 375 aaKnown RBP16.83■□□□□ 0.29
TMEM55B-207ENST00000557041 RSPH14Q9UHP6 348 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms