RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 LMCD1Q9NZU5 365 aa17.03■□□□□ 0.32
CHD8-211ENST00000556833 SEC63Q9UGP8 760 aaKnown RBP17.03■□□□□ 0.32
CHD8-211ENST00000556833 ZNF215Q9UL58 517 aaPredicted RBP17.03■□□□□ 0.32
CHD8-211ENST00000556833 PRC1O43663 620 aa17.02■□□□□ 0.32
CHD8-211ENST00000556833 ATP9AO75110 1047 aa17.02■□□□□ 0.32
CHD8-211ENST00000556833 SSTR3P32745 418 aaPredicted RBP17.02■□□□□ 0.32
CHD8-211ENST00000556833 PLA2G5P39877 138 aa17.02■□□□□ 0.32
CHD8-211ENST00000556833 IGBP1P78318 339 aa17.02■□□□□ 0.32
CHD8-211ENST00000556833 GPM6BQ13491 265 aa17.02■□□□□ 0.32
CHD8-211ENST00000556833 CASC1Q6TDU7 716 aa17.02■□□□□ 0.32
CHD8-211ENST00000556833 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.02■□□□□ 0.32
CHD8-211ENST00000556833 SP7Q8TDD2 431 aaPredicted RBP17.02■□□□□ 0.32
CHD8-211ENST00000556833 KIAA1671Q9BY89 1806 aa17.01■□□□□ 0.31
CHD8-211ENST00000556833 MEIS2O14770 477 aa17.01■□□□□ 0.31
CHD8-211ENST00000556833 GNAT1P11488 350 aa17.01■□□□□ 0.31
CHD8-211ENST00000556833 IBSPP21815 317 aaPredicted RBP17.01■□□□□ 0.31
CHD8-211ENST00000556833 CTNNB1P35222 781 aa17.01■□□□□ 0.31
CHD8-211ENST00000556833 TCF7P36402 384 aaPredicted RBP17.01■□□□□ 0.31
CHD8-211ENST00000556833 TCEAL5Q5H9L2 206 aa17.01■□□□□ 0.31
CHD8-211ENST00000556833 TMEM31Q5JXX7 168 aa17.01■□□□□ 0.31
CHD8-211ENST00000556833 PCNX4Q63HM2 1172 aa17.01■□□□□ 0.31
CHD8-211ENST00000556833 PTCRAQ6ISU1 281 aaPredicted RBP17.01■□□□□ 0.31
CHD8-211ENST00000556833 TMEM192Q8IY95 271 aa17.01■□□□□ 0.31
CHD8-211ENST00000556833 SRBD1Q8N5C6 995 aaKnown RBP17.01■□□□□ 0.31
CHD8-211ENST00000556833 TOP1MTQ969P6 601 aa17.01■□□□□ 0.31
CHD8-211ENST00000556833 MRPL38Q96DV4 380 aaKnown RBP17.01■□□□□ 0.31
CHD8-211ENST00000556833 SPZ1Q9BXG8 430 aa17.01■□□□□ 0.31
CHD8-211ENST00000556833 STAM2O75886 525 aa17■□□□□ 0.31
CHD8-211ENST00000556833 DDAH1O94760 285 aa17■□□□□ 0.31
CHD8-211ENST00000556833 CHRNA1P02708 482 aa17■□□□□ 0.31
CHD8-211ENST00000556833 PPFIA1Q13136 1202 aa17■□□□□ 0.31
CHD8-211ENST00000556833 NLRX1Q86UT6 975 aa17■□□□□ 0.31
CHD8-211ENST00000556833 C11orf16Q9NQ32 467 aa17■□□□□ 0.31
CHD8-211ENST00000556833 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.99■□□□□ 0.31
CHD8-211ENST00000556833 CCDC69A6NI79 296 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 KCNA2P16389 499 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 KIF5BP33176 963 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 CLUL1Q15846 466 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 PTPROQ16827 1216 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 LEXMQ3ZCV2 418 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 BANK1Q8NDB2 785 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 DNAJB3Q8WWF6 145 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 GLG1Q92896 1179 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 MAP4K1Q92918 833 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 PGBD1Q96JS3 809 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 FAM49AQ9H0Q0 323 aaPredicted RBP16.99■□□□□ 0.31
CHD8-211ENST00000556833 C5orf42Q9H799 3197 aa16.99■□□□□ 0.31
CHD8-211ENST00000556833 H3BNC9 293 aa16.98■□□□□ 0.31
CHD8-211ENST00000556833 SH2B2O14492 632 aaPredicted RBP16.98■□□□□ 0.31
CHD8-211ENST00000556833 CAND2O75155 1236 aa16.98■□□□□ 0.31
CHD8-211ENST00000556833 ITGB5P18084 799 aa16.98■□□□□ 0.31
CHD8-211ENST00000556833 ADAM17P78536 824 aa16.98■□□□□ 0.31
CHD8-211ENST00000556833 TMEM62Q0P6H9 643 aa16.98■□□□□ 0.31
CHD8-211ENST00000556833 GRIK4Q16099 956 aa16.98■□□□□ 0.31
CHD8-211ENST00000556833 TIGD5Q53EQ6 642 aa16.98■□□□□ 0.31
CHD8-211ENST00000556833 HEATR3Q7Z4Q2 680 aa16.98■□□□□ 0.31
CHD8-211ENST00000556833 PSTPIP2Q9H939 334 aa16.98■□□□□ 0.31
CHD8-211ENST00000556833 TUBE1Q9UJT0 475 aa16.98■□□□□ 0.31
CHD8-211ENST00000556833 HCN4Q9Y3Q4 1203 aa16.98■□□□□ 0.31
CHD8-211ENST00000556833 GSTTP1A0A1W2PQM5 241 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 LPIN1Q14693 890 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 SKAP1Q86WV1 359 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 MICU3Q86XE3 530 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 FAM178BQ8IXR5 827 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 GJD3Q8N144 294 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 FIBCD1Q8N539 461 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 TRAPPC12Q8WVT3 735 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 IL17RAQ96F46 866 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 UIMC1Q96RL1 719 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 CLDND1Q9NY35 253 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 CDY2AQ9Y6F7 541 aa16.97■□□□□ 0.31
CHD8-211ENST00000556833 NRCAMQ92823 1304 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 PIK3CDO00329 1044 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 SLC27A2O14975 620 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 GRM6O15303 877 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 MCM5P33992 734 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 MGAT3Q09327 533 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 MTMR1Q13613 665 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 FAM26DQ5JW98 314 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 APBB2Q92870 758 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 GPRASP2Q96D09 838 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 SAMD11Q96NU1 681 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 SENP7Q9BQF6 1050 aa16.96■□□□□ 0.31
CHD8-211ENST00000556833 LSG1Q9H089 658 aaKnown RBP16.96■□□□□ 0.31
CHD8-211ENST00000556833 NSUN3Q9H649 340 aaKnown RBP16.96■□□□□ 0.31
CHD8-211ENST00000556833 ADGRA3Q8IWK6 1321 aa16.96■□□□□ 0.3
CHD8-211ENST00000556833 COL4A6Q14031 1691 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 GRXCR2A6NFK2 248 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 SPDYE3A6NKU9 549 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 CD52P31358 61 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 GTF2F1P35269 517 aaKnown RBP eCLIP16.95■□□□□ 0.3
CHD8-211ENST00000556833 PAN2Q504Q3 1202 aaKnown RBP16.95■□□□□ 0.3
CHD8-211ENST00000556833 MARCH8Q5T0T0 291 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 XRRA1Q6P2D8 792 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 RPAINQ86UA6 219 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 SEPT1Q8WYJ6 367 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 TCEANC2Q96MN5 208 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 IGFLR1Q9H665 355 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 ERAP1Q9NZ08 941 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 PCDHA6Q9UN73 950 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms