RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 GNAT1P11488 350 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 NAPAP54920 295 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 KCNA1Q09470 495 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 SLC35G1Q2M3R5 365 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 HSDL1Q3SXM5 330 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 PCNX4Q63HM2 1172 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 SESTD1Q86VW0 696 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 RAB11FIP4Q86YS3 637 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 ZNF713Q8N859 430 aaPredicted RBP8.4□□□□□ -1.07
SCFD1-222ENST00000556768 ADAMTS19Q8TE59 1207 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 CCDC12Q8WUD4 166 aaPredicted RBP8.4□□□□□ -1.07
SCFD1-222ENST00000556768 HERVK_113Q902F9 699 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 JAKMIP1Q96N16 626 aaKnown RBP8.4□□□□□ -1.07
SCFD1-222ENST00000556768 INPP4AQ96PE3 977 aaPredicted RBP8.4□□□□□ -1.07
SCFD1-222ENST00000556768 SENP7Q9BQF6 1050 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 ALG1Q9BT22 464 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 SEMA6BQ9H3T3 888 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 ZNF215Q9UL58 517 aaPredicted RBP8.4□□□□□ -1.07
SCFD1-222ENST00000556768 USTQ9Y2C2 406 aa8.4□□□□□ -1.07
SCFD1-222ENST00000556768 V9GY48 417 aaPredicted RBP8.4□□□□□ -1.07
SCFD1-222ENST00000556768 PRUNE2Q8WUY3 3088 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 PLXNA1Q9UIW2 1896 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 hCG_1642624A0A1W2PR95 340 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 SPATA31C2B4DYI2 1134 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 H3BRB1 525 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 MEIS2O14770 477 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 RGS20O76081 388 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 FOSP01100 380 aaPredicted RBP8.39□□□□□ -1.07
SCFD1-222ENST00000556768 UBA1P22314 1058 aaKnown RBP8.39□□□□□ -1.07
SCFD1-222ENST00000556768 DNAJB2P25686 324 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 ICAM3P32942 547 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 HSPA4P34932 840 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 PSEN2P49810 448 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 METAP2P50579 478 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCFD1-222ENST00000556768 RAB30Q15771 203 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 ADCK5Q3MIX3 580 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 METTL7BQ6UX53 244 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 C16orf59Q7L2K0 433 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 CYFIP1Q7L576 1253 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 DEFB128Q7Z7B8 93 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 AFAP1L1Q8TED9 768 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 TNPO1Q92973 898 aaKnown RBP8.39□□□□□ -1.07
SCFD1-222ENST00000556768 TIFAQ96CG3 184 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 SCLYQ96I15 445 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 TCEANC2Q96MN5 208 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 TUT1Q9H6E5 874 aaKnown RBP8.39□□□□□ -1.07
SCFD1-222ENST00000556768 GTF2IRD1Q9UHL9 959 aa8.39□□□□□ -1.07
SCFD1-222ENST00000556768 KIF28PB7ZC32 967 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 SORBS3O60504 671 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 F2P00734 622 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 IQCF3P0C7M6 154 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 ZNF286BP0CG31 522 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 MRPS9P82933 396 aaKnown RBP8.38□□□□□ -1.07
SCFD1-222ENST00000556768 MTMR1Q13613 665 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 MCTP2Q6DN12 878 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 Q6ZUG5 572 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 IL31RAQ8NI17 732 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 BRF1Q92994 677 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 GPRASP2Q96D09 838 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 SLC28A3Q9HAS3 691 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 PPP4R2Q9NY27 417 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 HDAC6Q9UBN7 1215 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 VCANP13611 3396 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-222ENST00000556768 SMCO2A6NFE2 343 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 SELPP16109 830 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 ATP2A2P16615 1042 aaKnown RBP8.38□□□□□ -1.07
SCFD1-222ENST00000556768 NDUFV2P19404 249 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 ZNF76P36508 570 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 ADCY7P51828 1080 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 SP2Q02086 613 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 GDF6Q6KF10 455 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-222ENST00000556768 KAT2BQ92831 832 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 CDX2Q99626 313 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-222ENST00000556768 ADAM33Q9BZ11 813 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 WNT8AQ9H1J5 351 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 ZNF576Q9H609 170 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 RIC8AQ9NPQ8 531 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 BARHL2Q9NY43 387 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 BRPF3Q9ULD4 1205 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 PCDHA6Q9UN73 950 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 PCDHA8Q9Y5H6 950 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 SNX14Q9Y5W7 946 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 CYP46A1Q9Y6A2 500 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 UMODL1Q5DID0 1318 aa8.38□□□□□ -1.07
SCFD1-222ENST00000556768 FRMPD4Q14CM0 1322 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 C17orf102A2RUQ5 167 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 HOXD8P13378 290 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-222ENST00000556768 RPS6KB1P23443 525 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 GNA11P29992 359 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 ADD1P35611 737 aaKnown RBP8.37□□□□□ -1.07
SCFD1-222ENST00000556768 KCNJ6P48051 423 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 SP4Q02446 784 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 PTK7Q13308 1070 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 RASIP1Q5U651 963 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 CPLX2Q6PUV4 134 aaKnown RBP8.37□□□□□ -1.07
SCFD1-222ENST00000556768 ZNF454Q8N9F8 522 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 PPP1R13LQ8WUF5 828 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 GLG1Q92896 1179 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms