RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 PTGISQ16647 500 aa19.38■□□□□ 0.69
PSEN1-217ENST00000556533 EARS2Q5JPH6 523 aaKnown RBP19.38■□□□□ 0.69
PSEN1-217ENST00000556533 UBE2OQ9C0C9 1292 aaKnown RBP19.38■□□□□ 0.69
PSEN1-217ENST00000556533 TBX21Q9UL17 535 aa19.38■□□□□ 0.69
PSEN1-217ENST00000556533 HAS3O00219 553 aa19.37■□□□□ 0.69
PSEN1-217ENST00000556533 TIMP1P01033 207 aa19.37■□□□□ 0.69
PSEN1-217ENST00000556533 MARK3P27448 753 aa19.37■□□□□ 0.69
PSEN1-217ENST00000556533 CYP2C18P33260 490 aa19.37■□□□□ 0.69
PSEN1-217ENST00000556533 GDF6Q6KF10 455 aaPredicted RBP19.37■□□□□ 0.69
PSEN1-217ENST00000556533 NEK8Q86SG6 692 aa19.37■□□□□ 0.69
PSEN1-217ENST00000556533 GJA10Q969M2 543 aa19.37■□□□□ 0.69
PSEN1-217ENST00000556533 LENG9Q96B70 501 aa19.37■□□□□ 0.69
PSEN1-217ENST00000556533 GDF15Q99988 308 aa19.37■□□□□ 0.69
PSEN1-217ENST00000556533 TBC1D22BQ9NU19 505 aa19.37■□□□□ 0.69
PSEN1-217ENST00000556533 TCEAL9Q9UHQ7 104 aa19.37■□□□□ 0.69
PSEN1-217ENST00000556533 ZNF215Q9UL58 517 aaPredicted RBP19.37■□□□□ 0.69
PSEN1-217ENST00000556533 MSH4O15457 936 aa19.36■□□□□ 0.69
PSEN1-217ENST00000556533 DHX15O43143 795 aaKnown RBP19.36■□□□□ 0.69
PSEN1-217ENST00000556533 CCNT1O60563 726 aaKnown RBP19.36■□□□□ 0.69
PSEN1-217ENST00000556533 CCNE2O96020 404 aa19.36■□□□□ 0.69
PSEN1-217ENST00000556533 GNL2Q13823 731 aaKnown RBP19.36■□□□□ 0.69
PSEN1-217ENST00000556533 HIPK3Q9H422 1215 aa19.36■□□□□ 0.69
PSEN1-217ENST00000556533 SMARCAD1Q9H4L7 1026 aa19.36■□□□□ 0.69
PSEN1-217ENST00000556533 AZI2Q9H6S1 392 aa19.36■□□□□ 0.69
PSEN1-217ENST00000556533 DDX25Q9UHL0 483 aaKnown RBP19.36■□□□□ 0.69
PSEN1-217ENST00000556533 GTF2IRD1Q9UHL9 959 aa19.36■□□□□ 0.69
PSEN1-217ENST00000556533 CYP3A7-CYP3A51PA0A087WV96 503 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 BACH1O14867 736 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 MARCH6O60337 910 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 SMIM10L2AP0DMW4 78 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 SMIM10L2BP0DMW5 78 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 ATP2B1P20020 1258 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 CYP3A7P24462 503 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 ZNF200P98182 395 aaPredicted RBP19.35■□□□□ 0.69
PSEN1-217ENST00000556533 Q4G0T1 1027 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 SESTD1Q86VW0 696 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 FBXO18Q8NFZ0 1043 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 TNFRSF25Q93038 417 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 RNPEPQ9H4A4 650 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 SMC3Q9UQE7 1217 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 KIF3AQ9Y496 699 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 SAMM50Q9Y512 469 aa19.35■□□□□ 0.69
PSEN1-217ENST00000556533 UMODL1Q5DID0 1318 aa19.34■□□□□ 0.69
PSEN1-217ENST00000556533 GAS7O60861 476 aa19.34■□□□□ 0.69
PSEN1-217ENST00000556533 GJB2P29033 226 aa19.34■□□□□ 0.69
PSEN1-217ENST00000556533 CCL23P55773 120 aa19.34■□□□□ 0.69
PSEN1-217ENST00000556533 LRCH2Q5VUJ6 765 aa19.34■□□□□ 0.69
PSEN1-217ENST00000556533 NOC4LQ9BVI4 516 aaKnown RBP19.34■□□□□ 0.69
PSEN1-217ENST00000556533 SETD4Q9NVD3 440 aa19.34■□□□□ 0.69
PSEN1-217ENST00000556533 ERAP1Q9NZ08 941 aa19.34■□□□□ 0.69
PSEN1-217ENST00000556533 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.34■□□□□ 0.69
PSEN1-217ENST00000556533 C17orf102A2RUQ5 167 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 CHMP2AO43633 222 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 SLC37A4O43826 429 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 STAT5BP51692 787 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 KRT76Q01546 638 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 FPGSQ05932 587 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 HIC1Q14526 733 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 MFSD5Q6N075 450 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 SWSAP1Q6NVH7 229 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 MIS18BP1Q6P0N0 1132 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 MOXD1Q6UVY6 613 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 RETREG2Q8NC44 543 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 SLC5A5Q92911 643 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 ATP6V0A1Q93050 837 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 PCYT2Q99447 389 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 NAP1L4Q99733 375 aaKnown RBP19.33■□□□□ 0.68
PSEN1-217ENST00000556533 TEKT3Q9BXF9 490 aa19.33■□□□□ 0.68
PSEN1-217ENST00000556533 LGR5O75473 907 aa19.32■□□□□ 0.68
PSEN1-217ENST00000556533 GCFC2P16383 781 aaKnown RBP19.32■□□□□ 0.68
PSEN1-217ENST00000556533 FAM160B1Q5W0V3 765 aa19.32■□□□□ 0.68
PSEN1-217ENST00000556533 ZNF746Q6NUN9 644 aaPredicted RBP19.32■□□□□ 0.68
PSEN1-217ENST00000556533 ABHD15Q6UXT9 468 aa19.32■□□□□ 0.68
PSEN1-217ENST00000556533 TMEM199Q8N511 208 aa19.32■□□□□ 0.68
PSEN1-217ENST00000556533 MBOAT7Q96N66 472 aa19.32■□□□□ 0.68
PSEN1-217ENST00000556533 RIT2Q99578 217 aa19.32■□□□□ 0.68
PSEN1-217ENST00000556533 MYH7BA7E2Y1 1941 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 ATG7O95352 703 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 PSAPP07602 524 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 CSF2RAP15509 400 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 BMP8BP34820 402 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 IGBP1P78318 339 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 PPFIA1Q13136 1202 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 BFSP2Q13515 415 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 MCTP1Q6DN14 999 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 PPP4R3AQ6IN85 833 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 TRMT1LQ7Z2T5 733 aaKnown RBP19.31■□□□□ 0.68
PSEN1-217ENST00000556533 CKAP2LQ8IYA6 745 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 SCLYQ96I15 445 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 FOXP1Q9H334 677 aaPredicted RBP19.31■□□□□ 0.68
PSEN1-217ENST00000556533 PRO3102Q9H379 93 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 UNC45AQ9H3U1 944 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 ZNF302Q9NR11 478 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 TRPC6Q9Y210 931 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 PCDHA10Q9Y5I2 948 aa19.31■□□□□ 0.68
PSEN1-217ENST00000556533 EMSYQ7Z589 1322 aa19.3■□□□□ 0.68
PSEN1-217ENST00000556533 CEP290O15078 2479 aa19.3■□□□□ 0.68
PSEN1-217ENST00000556533 H3BQV1 296 aa19.3■□□□□ 0.68
PSEN1-217ENST00000556533 ACRP10323 421 aa19.3■□□□□ 0.68
PSEN1-217ENST00000556533 GNAT1P11488 350 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms