RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CCNE2O96020 404 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 FGBP02675 491 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 CYP3A4P08684 503 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 CKBP12277 381 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 MARK3P27448 753 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 ST3GAL1Q11201 340 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 PTK7Q13308 1070 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 BFSP2Q13515 415 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 ME3Q16798 604 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 REXO1Q8N1G1 1221 aaKnown RBP9.25□□□□□ -0.93
VTI1B-206ENST00000556461 RETREG2Q8NC44 543 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 GIMAP8Q8ND71 665 aaPredicted RBP9.25□□□□□ -0.93
VTI1B-206ENST00000556461 SEPT1Q8WYJ6 367 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 ZBTB10Q96DT7 871 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 OSBPL7Q9BZF2 842 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 JPH1Q9HDC5 661 aaPredicted RBP9.25□□□□□ -0.93
VTI1B-206ENST00000556461 SETD4Q9NVD3 440 aa9.25□□□□□ -0.93
VTI1B-206ENST00000556461 PRUNE2Q8WUY3 3088 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.24□□□□□ -0.93
VTI1B-206ENST00000556461 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.24□□□□□ -0.93
VTI1B-206ENST00000556461 C17orf102A2RUQ5 167 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 M0R2N6 131 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 DDX39AO00148 427 aaKnown RBP9.24□□□□□ -0.93
VTI1B-206ENST00000556461 CPLX1O14810 134 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 MAFGO15525 162 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 DHX15O43143 795 aaKnown RBP9.24□□□□□ -0.93
VTI1B-206ENST00000556461 LGR5O75473 907 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 DEXIO95424 95 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 SELPP16109 830 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 GNA11P29992 359 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 ZNF76P36508 570 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 NEK4P51957 841 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 RABGGTBP53611 331 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 NLRP5P59047 1200 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 ACTR2P61160 394 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 ADAM17P78536 824 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 RBL2Q08999 1139 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 ZNF618Q5T7W0 954 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 RUFY4Q6ZNE9 571 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 LRRC8DQ7L1W4 858 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 NIPA1Q7RTP0 329 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 SERINC5Q86VE9 423 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 PLA2G4DQ86XP0 818 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 TEX2Q8IWB9 1127 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 TRIM22Q8IYM9 498 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 RPUSD2Q8IZ73 545 aaKnown RBP9.24□□□□□ -0.93
VTI1B-206ENST00000556461 CAGE1Q8TC20 777 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 AFAP1L1Q8TED9 768 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 CCDC12Q8WUD4 166 aaPredicted RBP9.24□□□□□ -0.93
VTI1B-206ENST00000556461 LMBR1Q8WVP7 490 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 ATP6V0A1Q93050 837 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 LENG9Q96B70 501 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 KIF2CQ99661 725 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 PBX4Q9BYU1 374 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 SLKQ9H2G2 1235 aaPredicted RBP9.24□□□□□ -0.93
VTI1B-206ENST00000556461 SEMA6BQ9H3T3 888 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 SLC9A2Q9UBY0 812 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 KCNJ14Q9UNX9 436 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 TRIP12Q14669 1992 aaPredicted RBP9.24□□□□□ -0.93
VTI1B-206ENST00000556461 NFASCO94856 1347 aa9.24□□□□□ -0.93
VTI1B-206ENST00000556461 ZBBXA8MT70 800 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 FDPSP14324 419 aaKnown RBP9.23□□□□□ -0.93
VTI1B-206ENST00000556461 MYOGP15173 224 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 DNAJB2P25686 324 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 CIITAP33076 1130 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 RFC2P35250 354 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 THPOP40225 353 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 PRR16Q569H4 304 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 MARCH8Q5T0T0 291 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 ZNF697Q5TEC3 545 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 CCDC148Q8NFR7 591 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 GJA10Q969M2 543 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 SDF4Q9BRK5 362 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 FTOQ9C0B1 505 aaKnown RBP eCLIP9.23□□□□□ -0.93
VTI1B-206ENST00000556461 SH3GLB2Q9NR46 395 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 PCDHA4Q9UN74 947 aa9.23□□□□□ -0.93
VTI1B-206ENST00000556461 YBX2Q9Y2T7 364 aaKnown RBP9.23□□□□□ -0.93
VTI1B-206ENST00000556461 UNC80Q8N2C7 3258 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 TANC1Q9C0D5 1861 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 IPO5O00410 1097 aaKnown RBP9.22□□□□□ -0.93
VTI1B-206ENST00000556461 JAK2O60674 1132 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 ATG7O95352 703 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 CXCL10P02778 98 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 PFKMP08237 780 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 CTSHP09668 335 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 PPFIA1Q13136 1202 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 PLCB4Q15147 1175 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 EARS2Q5JPH6 523 aaKnown RBP9.22□□□□□ -0.93
VTI1B-206ENST00000556461 CPLX2Q6PUV4 134 aaKnown RBP9.22□□□□□ -0.93
VTI1B-206ENST00000556461 ABHD15Q6UXT9 468 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 TMCO2Q7Z6W1 182 aaPredicted RBP9.22□□□□□ -0.93
VTI1B-206ENST00000556461 BLIDQ8IZY5 108 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 CCDC155Q8N6L0 562 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 DAGLBQ8NCG7 672 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 NSUN7Q8NE18 718 aaKnown RBP9.22□□□□□ -0.93
VTI1B-206ENST00000556461 BICD2Q8TD16 824 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 OXER1Q8TDS5 423 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 TBCKQ8TEA7 893 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 TRAPPC12Q8WVT3 735 aa9.22□□□□□ -0.93
VTI1B-206ENST00000556461 GLG1Q92896 1179 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms