RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PKD2L1Q9P0L9 805 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 VCANP13611 3396 aa25.91■■□□□ 1.74
ACTN1-220ENST00000556433 PRRC2BQ5JSZ5 2229 aaKnown RBP25.9■■□□□ 1.74
ACTN1-220ENST00000556433 GRB10Q13322 594 aa25.9■■□□□ 1.74
ACTN1-220ENST00000556433 KRT32Q14532 448 aa25.9■■□□□ 1.74
ACTN1-220ENST00000556433 PLEKHG4Q58EX7 1191 aa25.9■■□□□ 1.74
ACTN1-220ENST00000556433 WWC2Q6AWC2 1192 aa25.9■■□□□ 1.74
ACTN1-220ENST00000556433 LMBR1Q8WVP7 490 aa25.9■■□□□ 1.74
ACTN1-220ENST00000556433 EHMT1Q9H9B1 1298 aa25.9■■□□□ 1.74
ACTN1-220ENST00000556433 V9GY48 417 aaPredicted RBP25.9■■□□□ 1.74
ACTN1-220ENST00000556433 CNTNAP5Q8WYK1 1306 aa25.89■■□□□ 1.74
ACTN1-220ENST00000556433 GSTTP1A0A1W2PQM5 241 aa25.89■■□□□ 1.74
ACTN1-220ENST00000556433 MAFGO15525 162 aa25.89■■□□□ 1.74
ACTN1-220ENST00000556433 AMHP03971 560 aa25.89■■□□□ 1.74
ACTN1-220ENST00000556433 NAPAP54920 295 aa25.89■■□□□ 1.74
ACTN1-220ENST00000556433 ADAM17P78536 824 aa25.89■■□□□ 1.74
ACTN1-220ENST00000556433 SEPT8Q92599 483 aa25.89■■□□□ 1.74
ACTN1-220ENST00000556433 DOCK5Q9H7D0 1870 aa25.89■■□□□ 1.73
ACTN1-220ENST00000556433 NRCAMQ92823 1304 aa25.88■■□□□ 1.73
ACTN1-220ENST00000556433 FUT2Q10981 343 aa25.88■■□□□ 1.73
ACTN1-220ENST00000556433 MYOCDQ8IZQ8 938 aa25.88■■□□□ 1.73
ACTN1-220ENST00000556433 IL27Q8NEV9 243 aa25.88■■□□□ 1.73
ACTN1-220ENST00000556433 OSBPL7Q9BZF2 842 aa25.88■■□□□ 1.73
ACTN1-220ENST00000556433 RIC8AQ9NPQ8 531 aa25.88■■□□□ 1.73
ACTN1-220ENST00000556433 PTPRSQ13332 1948 aa25.87■■□□□ 1.73
ACTN1-220ENST00000556433 KLF18A0A0U1RQI7 1052 aa25.87■■□□□ 1.73
ACTN1-220ENST00000556433 TYW1BQ6NUM6 668 aa25.87■■□□□ 1.73
ACTN1-220ENST00000556433 GLG1Q92896 1179 aa25.87■■□□□ 1.73
ACTN1-220ENST00000556433 ERAP1Q9NZ08 941 aa25.87■■□□□ 1.73
ACTN1-220ENST00000556433 MTUS1Q9ULD2 1270 aa25.87■■□□□ 1.73
ACTN1-220ENST00000556433 INSL6Q9Y581 213 aa25.87■■□□□ 1.73
ACTN1-220ENST00000556433 LINC01553A4QN01 128 aa25.86■■□□□ 1.73
ACTN1-220ENST00000556433 GOLGA8AA7E2F4 631 aa25.86■■□□□ 1.73
ACTN1-220ENST00000556433 GOLGA8BA8MQT2 603 aa25.86■■□□□ 1.73
ACTN1-220ENST00000556433 LPXNO60711 386 aa25.86■■□□□ 1.73
ACTN1-220ENST00000556433 HMGB1P09429 215 aaKnown RBP25.86■■□□□ 1.73
ACTN1-220ENST00000556433 MARK3P27448 753 aa25.86■■□□□ 1.73
ACTN1-220ENST00000556433 ERVK-21P61565 698 aa25.86■■□□□ 1.73
ACTN1-220ENST00000556433 MKRN4PQ13434 485 aaPredicted RBP25.86■■□□□ 1.73
ACTN1-220ENST00000556433 TGS1Q96RS0 853 aaKnown RBP25.86■■□□□ 1.73
ACTN1-220ENST00000556433 MXRA8Q9BRK3 442 aa25.86■■□□□ 1.73
ACTN1-220ENST00000556433 SMARCAD1Q9H4L7 1026 aa25.86■■□□□ 1.73
ACTN1-220ENST00000556433 NAP1L2Q9ULW6 460 aaPredicted RBP25.86■■□□□ 1.73
ACTN1-220ENST00000556433 SMCO2A6NFE2 343 aa25.85■■□□□ 1.73
ACTN1-220ENST00000556433 TNFRSF10AO00220 468 aa25.85■■□□□ 1.73
ACTN1-220ENST00000556433 FOSP01100 380 aaPredicted RBP25.85■■□□□ 1.73
ACTN1-220ENST00000556433 ADCY7P51828 1080 aa25.85■■□□□ 1.73
ACTN1-220ENST00000556433 FGD1P98174 961 aa25.85■■□□□ 1.73
ACTN1-220ENST00000556433 PPFIA1Q13136 1202 aa25.85■■□□□ 1.73
ACTN1-220ENST00000556433 FAM26DQ5JW98 314 aa25.85■■□□□ 1.73
ACTN1-220ENST00000556433 PPP1R18Q6NYC8 613 aa25.85■■□□□ 1.73
ACTN1-220ENST00000556433 ADAMTS19Q8TE59 1207 aa25.85■■□□□ 1.73
ACTN1-220ENST00000556433 GDPD5Q8WTR4 605 aa25.85■■□□□ 1.73
ACTN1-220ENST00000556433 PGBD1Q96JS3 809 aa25.85■■□□□ 1.73
ACTN1-220ENST00000556433 KCNH7Q9NS40 1196 aa25.85■■□□□ 1.73
ACTN1-220ENST00000556433 FAM217BQ9NTX9 383 aaPredicted RBP25.85■■□□□ 1.73
ACTN1-220ENST00000556433 STXBP3O00186 592 aa25.84■■□□□ 1.73
ACTN1-220ENST00000556433 CDC27P30260 824 aa25.84■■□□□ 1.73
ACTN1-220ENST00000556433 TFF2Q03403 129 aa25.84■■□□□ 1.73
ACTN1-220ENST00000556433 RUFY4Q6ZNE9 571 aa25.84■■□□□ 1.73
ACTN1-220ENST00000556433 TEX2Q8IWB9 1127 aa25.84■■□□□ 1.73
ACTN1-220ENST00000556433 CYP2W1Q8TAV3 490 aa25.84■■□□□ 1.73
ACTN1-220ENST00000556433 SUGCTQ9HAC7 445 aa25.84■■□□□ 1.73
ACTN1-220ENST00000556433 JPH1Q9HDC5 661 aaPredicted RBP25.84■■□□□ 1.73
ACTN1-220ENST00000556433 hCG_1984214I3L0E3 225 aa25.83■■□□□ 1.73
ACTN1-220ENST00000556433 CPA1P15085 419 aa25.83■■□□□ 1.73
ACTN1-220ENST00000556433 GRIK4Q16099 956 aa25.83■■□□□ 1.73
ACTN1-220ENST00000556433 AAK1Q2M2I8 961 aa25.83■■□□□ 1.73
ACTN1-220ENST00000556433 TAF2Q6P1X5 1199 aa25.83■■□□□ 1.73
ACTN1-220ENST00000556433 ZNF713Q8N859 430 aaPredicted RBP25.83■■□□□ 1.73
ACTN1-220ENST00000556433 BARHL2Q9NY43 387 aa25.83■■□□□ 1.73
ACTN1-220ENST00000556433 LMCD1Q9NZU5 365 aa25.83■■□□□ 1.73
ACTN1-220ENST00000556433 SLC9A2Q9UBY0 812 aa25.83■■□□□ 1.73
ACTN1-220ENST00000556433 CHRNA1P02708 482 aa25.82■■□□□ 1.72
ACTN1-220ENST00000556433 ADD1P35611 737 aaKnown RBP25.82■■□□□ 1.72
ACTN1-220ENST00000556433 RCAN1P53805 252 aa25.82■■□□□ 1.72
ACTN1-220ENST00000556433 HTRA4P83105 476 aaPredicted RBP25.82■■□□□ 1.72
ACTN1-220ENST00000556433 RPAINQ86UA6 219 aa25.82■■□□□ 1.72
ACTN1-220ENST00000556433 RSPH3Q86UC2 560 aa25.82■■□□□ 1.72
ACTN1-220ENST00000556433 APBB2Q92870 758 aa25.82■■□□□ 1.72
ACTN1-220ENST00000556433 TOP1MTQ969P6 601 aa25.82■■□□□ 1.72
ACTN1-220ENST00000556433 SDF4Q9BRK5 362 aa25.82■■□□□ 1.72
ACTN1-220ENST00000556433 ANO3Q9BYT9 981 aa25.82■■□□□ 1.72
ACTN1-220ENST00000556433 GLT8D2Q9H1C3 349 aa25.82■■□□□ 1.72
ACTN1-220ENST00000556433 TMEM260Q9NX78 707 aa25.82■■□□□ 1.72
ACTN1-220ENST00000556433 SPTBN5Q9NRC6 3674 aaKnown RBP25.82■■□□□ 1.72
ACTN1-220ENST00000556433 KAT6AQ92794 2004 aa25.81■■□□□ 1.72
ACTN1-220ENST00000556433 UPP2O95045 317 aa25.81■■□□□ 1.72
ACTN1-220ENST00000556433 ARP10275 920 aa25.81■■□□□ 1.72
ACTN1-220ENST00000556433 CEP55Q53EZ4 464 aa25.81■■□□□ 1.72
ACTN1-220ENST00000556433 KCNB2Q92953 911 aa25.81■■□□□ 1.72
ACTN1-220ENST00000556433 UHRF1Q96T88 793 aaPredicted RBP25.81■■□□□ 1.72
ACTN1-220ENST00000556433 PCYT2Q99447 389 aa25.81■■□□□ 1.72
ACTN1-220ENST00000556433 IFIH1Q9BYX4 1025 aaKnown RBP25.81■■□□□ 1.72
ACTN1-220ENST00000556433 AZI2Q9H6S1 392 aa25.81■■□□□ 1.72
ACTN1-220ENST00000556433 TUBE1Q9UJT0 475 aa25.81■■□□□ 1.72
ACTN1-220ENST00000556433 COG5Q9UP83 839 aa25.81■■□□□ 1.72
ACTN1-220ENST00000556433 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.8■■□□□ 1.72
ACTN1-220ENST00000556433 BMP1P13497 986 aa25.8■■□□□ 1.72
ACTN1-220ENST00000556433 METAP2P50579 478 aaKnown RBP eCLIP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms