RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 GSTTP1A0A1W2PQM5 241 aa13.11□□□□□ -0.31
SLIRP-206ENST00000556375 M0R2N6 131 aa13.11□□□□□ -0.31
SLIRP-206ENST00000556375 SMIM10L2AP0DMW4 78 aa13.11□□□□□ -0.31
SLIRP-206ENST00000556375 SMIM10L2BP0DMW5 78 aa13.11□□□□□ -0.31
SLIRP-206ENST00000556375 CIITAP33076 1130 aa13.11□□□□□ -0.31
SLIRP-206ENST00000556375 PTK7Q13308 1070 aa13.11□□□□□ -0.31
SLIRP-206ENST00000556375 NSUN7Q8NE18 718 aaKnown RBP13.11□□□□□ -0.31
SLIRP-206ENST00000556375 AFAP1L1Q8TED9 768 aa13.11□□□□□ -0.31
SLIRP-206ENST00000556375 DHX38Q92620 1227 aaKnown RBP13.11□□□□□ -0.31
SLIRP-206ENST00000556375 LRCH3Q96II8 777 aa13.11□□□□□ -0.31
SLIRP-206ENST00000556375 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.11□□□□□ -0.316e-7■■■□□ 18.5
SLIRP-206ENST00000556375 PHF20Q9BVI0 1012 aa13.11□□□□□ -0.31
SLIRP-206ENST00000556375 UPF2Q9HAU5 1272 aaKnown RBP13.11□□□□□ -0.31
SLIRP-206ENST00000556375 LIMCH1Q9UPQ0 1083 aa13.11□□□□□ -0.31
SLIRP-206ENST00000556375 C17orf102A2RUQ5 167 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
SLIRP-206ENST00000556375 PFKMP08237 780 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 RFC2P35250 354 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 USP11P51784 963 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 ACTR2P61160 394 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 ST3GAL1Q11201 340 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 HIC1Q14526 733 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 TMEM240Q5SV17 173 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 GPR153Q6NV75 609 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 C16orf59Q7L2K0 433 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 RETREG2Q8NC44 543 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 LENG9Q96B70 501 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 SCLYQ96I15 445 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 ERAP1Q9NZ08 941 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 KCNJ14Q9UNX9 436 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 MYH9P35579 1960 aaKnown RBP13.1□□□□□ -0.31
SLIRP-206ENST00000556375 TET1Q8NFU7 2136 aa13.1□□□□□ -0.31
SLIRP-206ENST00000556375 LGR5O75473 907 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 IQCF3P0C7M6 154 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 ACRP10323 421 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 GNAT1P11488 350 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 FDPSP14324 419 aaKnown RBP13.09□□□□□ -0.31
SLIRP-206ENST00000556375 ZNF200P98182 395 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-206ENST00000556375 NONOQ15233 471 aaKnown RBP eCLIP13.09□□□□□ -0.31
SLIRP-206ENST00000556375 RABEP1Q15276 862 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 PRR16Q569H4 304 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 RASIP1Q5U651 963 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 ZNF365Q70YC5 407 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 LRRC8DQ7L1W4 858 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 SERINC5Q86VE9 423 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 RPUSD2Q8IZ73 545 aaKnown RBP13.09□□□□□ -0.31
SLIRP-206ENST00000556375 TBCKQ8TEA7 893 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 GLG1Q92896 1179 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 ATP6V0A1Q93050 837 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 ZNF577Q9BSK1 485 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 MTIF3Q9H2K0 278 aaKnown RBP13.09□□□□□ -0.31
SLIRP-206ENST00000556375 SMARCAD1Q9H4L7 1026 aa13.09□□□□□ -0.31
SLIRP-206ENST00000556375 GBF1Q92538 1859 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 DDX39AO00148 427 aaKnown RBP13.08□□□□□ -0.32
SLIRP-206ENST00000556375 DHX15O43143 795 aaKnown RBP13.08□□□□□ -0.32
SLIRP-206ENST00000556375 EDIL3O43854 480 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 JAK2O60674 1132 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 DTNBO60941 627 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 ATG7O95352 703 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 PARNO95453 639 aaKnown RBP13.08□□□□□ -0.32
SLIRP-206ENST00000556375 CCNE2O96020 404 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 CKBP12277 381 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 SELPP16109 830 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.32
SLIRP-206ENST00000556375 MOXD1Q6UVY6 613 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 LMBR1Q8WVP7 490 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 HERVK_113Q902F9 699 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 WNT8BQ93098 351 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 VWCEQ96DN2 955 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 ZSCAN31Q96LW9 406 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-206ENST00000556375 PCYT2Q99447 389 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 RNPEPQ9H4A4 650 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 AZI2Q9H6S1 392 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 SH2B1Q9NRF2 756 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-206ENST00000556375 GJB4Q9NTQ9 266 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 TBC1D22BQ9NU19 505 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 TCEAL9Q9UHQ7 104 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 SIP14410 1827 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 NRCAMQ92823 1304 aa13.08□□□□□ -0.32
SLIRP-206ENST00000556375 CYP3A7-CYP3A51PA0A087WV96 503 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 CCDC194A0A1B0GVG4 234 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 TREHO43280 583 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 FGBP02675 491 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 CYP3A7P24462 503 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 MARK3P27448 753 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 ADAM17P78536 824 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 SMAD3P84022 425 aaKnown RBP13.07□□□□□ -0.32
SLIRP-206ENST00000556375 KRT76Q01546 638 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 PPFIA1Q13136 1202 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 ZNF746Q6NUN9 644 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-206ENST00000556375 ABHD15Q6UXT9 468 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 PLPPR4Q7Z2D5 763 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 DEFB128Q7Z7B8 93 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 CCDC83Q8IWF9 413 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-206ENST00000556375 MBOAT7Q96N66 472 aa13.07□□□□□ -0.32
SLIRP-206ENST00000556375 LLPHQ9BRT6 129 aaKnown RBP13.07□□□□□ -0.32
SLIRP-206ENST00000556375 BRMS1Q9HCU9 246 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms