RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 TREHO43280 583 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 PEX10O60683 326 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 GADD45BO75293 160 aaPredicted RBP10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 MAPK4P31152 587 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 HERVK_113P62684 666 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 ATP8B2P98198 1209 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 DSC3Q14574 896 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 NAA16Q6N069 864 aaPredicted RBP10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 ATF7IPQ6VMQ6 1270 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 ADGRA1Q86SQ6 560 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 EPS8L3Q8TE67 593 aaKnown RBP10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 SSH3Q8TE77 659 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 C11orf49Q9H6J7 331 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 ABCB6Q9NP58 842 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 AATFQ9NY61 560 aaKnown RBP eCLIP10.93□□□□□ -0.665e-24■□□□□ 11.1
GTF2A1-204ENST00000556268 TMOD4Q9NZQ9 345 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 PALD1Q9ULE6 856 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 DOCK1Q14185 1865 aa10.93□□□□□ -0.66
GTF2A1-204ENST00000556268 IRX3P78415 501 aaPredicted RBP10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 GSTM4Q03013 218 aa10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 CACNB2Q08289 660 aaPredicted RBP10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 ZNF423Q2M1K9 1284 aa10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 SHROOM1Q2M3G4 852 aaPredicted RBP10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 TNNI3KQ59H18 835 aa10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 TATDN1Q6P1N9 297 aa10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 C7orf61Q8IZ16 206 aa10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 SOCS4Q8WXH5 440 aa10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 C12orf42Q96LP6 360 aa10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 ZNF576Q9H609 170 aa10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 NOP58Q9Y2X3 529 aaKnown RBP10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 FPGT-TNNI3KV9GXZ4 949 aa10.92□□□□□ -0.66
GTF2A1-204ENST00000556268 PFASO15067 1338 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 FLT1P17948 1338 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 LOC100289279A0A1B0GTE1 492 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 BCAR3O75815 825 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 ITPKAP23677 461 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 MAGEA10P43363 369 aaPredicted RBP10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 ERVK-24P63145 666 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 GRM2Q14416 872 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 CCDC158Q5M9N0 1113 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 ZMYM1Q5SVZ6 1142 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 MAPKAPK5Q8IW41 473 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 ARMC10Q8N2F6 343 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 FAM46AQ96IP4 442 aaKnown RBP10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 DBNDD2Q9BQY9 259 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 NOL10Q9BSC4 688 aaKnown RBP10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 PORCNQ9H237 461 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 ZBTB21Q9ULJ3 1066 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 ZMYND8Q9ULU4 1186 aaPredicted RBP10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 TNNQ9UQP3 1299 aa10.91□□□□□ -0.66
GTF2A1-204ENST00000556268 PNMA6FA0A0J9YX94 578 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 CNMDO75829 334 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 UVSSAQ2YD98 709 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 ANKRD34AQ69YU3 496 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 LBX2Q6XYB7 198 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 CATSPERGQ6ZRH7 1159 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 GPR142Q7Z601 462 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 PLEKHH3Q7Z736 793 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 TDHQ8IZJ6 230 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 UTP4Q969X6 686 aaKnown RBP10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 EDC3Q96F86 508 aaKnown RBP10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 NRSN2Q9GZP1 204 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 PIH1D3Q9NQM4 214 aaKnown RBP10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 MTMR10Q9NXD2 777 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 RABGAP1Q9Y3P9 1069 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 PLXNB2O15031 1838 aa10.9□□□□□ -0.66
GTF2A1-204ENST00000556268 LOC285556D6RIA3 1793 aa10.9□□□□□ -0.67
GTF2A1-204ENST00000556268 PATL2C9JE40 543 aaKnown RBP10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 CCER2I3L3R5 266 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 DLGAP3O95886 979 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 GH2P01242 217 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 HOXC6P09630 235 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 SYN1P17600 705 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 CCND3P30281 292 aaPredicted RBP10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 RGS2P41220 211 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 PREPP48147 710 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 DYNLL1P63167 89 aaKnown RBP10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 ENOX2Q16206 610 aaKnown RBP10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 CCL14Q16627 93 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 TTC39AQ5SRH9 613 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 FDX2Q6P4F2 183 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 TMED8Q6PL24 325 aaPredicted RBP10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 CERS3Q8IU89 383 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 CRACR2BQ8N4Y2 399 aaPredicted RBP10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 GLIS3Q8NEA6 775 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 EAF2Q96CJ1 260 aaPredicted RBP10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 STXBP5LQ9Y2K9 1186 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 ALPK3Q96L96 1907 aa10.89□□□□□ -0.67
GTF2A1-204ENST00000556268 SLC15A5A6NIM6 579 aa10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 SURF6O75683 361 aaKnown RBP10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 B3GALT4O96024 378 aa10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 ZKSCAN1P17029 563 aaPredicted RBP10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 PLCB3Q01970 1234 aa10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 PDE3AQ14432 1141 aa10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 LRRC26Q2I0M4 334 aa10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 TMEM57Q8N5G2 664 aa10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 DEFB123Q8N688 67 aa10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 KIAA1683Q9H0B3 1180 aa10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 FLRT1Q9NZU1 646 aa10.88□□□□□ -0.67
GTF2A1-204ENST00000556268 SAP30BPQ9UHR5 308 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms