RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 LEXMQ3ZCV2 418 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 SH3PXD2AQ5TCZ1 1133 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 CXCL17Q6UXB2 119 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 MAGEB6Q8N7X4 407 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-236ENST00000556220 DBNDD2Q9BQY9 259 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 SH2D4AQ9H788 454 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 FBXO28Q9NVF7 368 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 PPP1R9AQ9ULJ8 1098 aa8.28□□□□□ -1.08
ATXN3-236ENST00000556220 NOB1Q9ULX3 412 aaKnown RBP8.28□□□□□ -1.08
ATXN3-236ENST00000556220 ZEB2O60315 1214 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 IDH1O75874 414 aaKnown RBP8.27□□□□□ -1.09
ATXN3-236ENST00000556220 GNAI3P08754 354 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 ICA1Q05084 483 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 SFSWAPQ12872 951 aaKnown RBP8.27□□□□□ -1.09
ATXN3-236ENST00000556220 TNNI3KQ59H18 835 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 TMED8Q6PL24 325 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-236ENST00000556220 TNFRSF25Q93038 417 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 TRIM11Q96F44 468 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 SLC9A7Q96T83 725 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 PLVAPQ9BX97 442 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 TEX13BQ9BXU2 312 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 UBE2ZQ9H832 354 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-236ENST00000556220 MRS2Q9HD23 443 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 MCM9Q9NXL9 1143 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 FPGT-TNNI3KV9GXZ4 949 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 ZNFX1Q9P2E3 1918 aaKnown RBP8.27□□□□□ -1.09
ATXN3-236ENST00000556220 ASTN1O14525 1302 aa8.27□□□□□ -1.09
ATXN3-236ENST00000556220 SPDYE3A6NKU9 549 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 DCXO43602 365 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 ACTN1P12814 892 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 AKR1B1P15121 316 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 IL9P15248 144 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 TNFAIP2Q03169 654 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 NOL8Q76FK4 1167 aaKnown RBP8.26□□□□□ -1.09
ATXN3-236ENST00000556220 ARMCX2Q7L311 632 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 DEFB128Q7Z7B8 93 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 HERC6Q8IVU3 1022 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 STAG2Q8N3U4 1231 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 FGD4Q96M96 766 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 RIOK1Q9BRS2 568 aaKnown RBP8.26□□□□□ -1.09
ATXN3-236ENST00000556220 API5Q9BZZ5 524 aaKnown RBP8.26□□□□□ -1.09
ATXN3-236ENST00000556220 KATNBL1Q9H079 304 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 SMC4Q9NTJ3 1288 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 SWAP70Q9UH65 585 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 GNEQ9Y223 722 aaKnown RBP8.26□□□□□ -1.09
ATXN3-236ENST00000556220 RIPK3Q9Y572 518 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 ZFHX2Q9C0A1 2572 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-236ENST00000556220 RIF1Q5UIP0 2472 aaKnown RBP8.26□□□□□ -1.09
ATXN3-236ENST00000556220 ZNF318Q5VUA4 2279 aa8.26□□□□□ -1.09
ATXN3-236ENST00000556220 PNMA6EA0A0J9YXQ4 647 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-236ENST00000556220 E9PSI1 815 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 ATP2A1O14983 1001 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 DYNC1LI2O43237 492 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-236ENST00000556220 DKK1O94907 266 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 SUPT20HL2P0C7V6 817 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 SPATA31C1P0DKV0 1188 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 KCNA5P22460 613 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 RFC2P35250 354 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 CHRNA4P43681 627 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 SPEM2Q0P670 501 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 FSCN1Q16658 493 aaKnown RBP8.25□□□□□ -1.09
ATXN3-236ENST00000556220 FAM83BQ5T0W9 1011 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 SNRNP48Q6IEG0 339 aaKnown RBP8.25□□□□□ -1.09
ATXN3-236ENST00000556220 SPRED2Q7Z698 418 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 CLEC10AQ8IUN9 316 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 CCDC144CPQ8IYA2 1237 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 TSEN2Q8NCE0 465 aaKnown RBP8.25□□□□□ -1.09
ATXN3-236ENST00000556220 CCDC17Q96LX7 622 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 MFSD14AQ96MC6 490 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 CEP63Q96MT8 703 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 SLC30A3Q99726 388 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 PHACTR1Q9C0D0 580 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 AP5M1Q9H0R1 490 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 ALDH8A1Q9H2A2 487 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-236ENST00000556220 BRD7Q9NPI1 651 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 LRRC37A2A6NM11 1700 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 DMDP11532 3685 aa8.25□□□□□ -1.09
ATXN3-236ENST00000556220 SPTBN4Q9H254 2564 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 FURINP09958 794 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 CYP2D6P10635 497 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 CYP2C9P11712 490 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 EEF2P13639 858 aaKnown RBP8.24□□□□□ -1.09
ATXN3-236ENST00000556220 PSMC6P62333 389 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 HFE2Q6ZVN8 426 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 TLK2Q86UE8 772 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 ANKRD35Q8N283 1001 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 GDPD5Q8WTR4 605 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 ANKS1AQ92625 1134 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 DYNLL2Q96FJ2 89 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 SLF1Q9BQI6 1058 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 CRNKL1Q9BZJ0 848 aaKnown RBP8.24□□□□□ -1.09
ATXN3-236ENST00000556220 ANTXR1Q9H6X2 564 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 KANSL2Q9H9L4 492 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 SUGCTQ9HAC7 445 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 DCP1AQ9NPI6 582 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-236ENST00000556220 TRMT13Q9NUP7 481 aaKnown RBP8.24□□□□□ -1.09
ATXN3-236ENST00000556220 Q9Y3F1 56 aa8.24□□□□□ -1.09
ATXN3-236ENST00000556220 ZNF536O15090 1300 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms