RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ERAP1Q9NZ08 941 aa8.93□□□□□ -0.98
PTCSC3-201ENST00000556013 PCDHA6Q9UN73 950 aa8.93□□□□□ -0.98
PTCSC3-201ENST00000556013 PCDHA8Q9Y5H6 950 aa8.93□□□□□ -0.98
PTCSC3-201ENST00000556013 SCN5AQ14524 2016 aa8.93□□□□□ -0.98
PTCSC3-201ENST00000556013 NFASCO94856 1347 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 CCDC196A0A1B0GTZ2 297 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 GSTTP1A0A1W2PQM5 241 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 MBLAC1A4D2B0 266 aaPredicted RBP8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 LINC01553A4QN01 128 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 RFXAPO00287 272 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 EPB41L2O43491 1005 aaKnown RBP8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 ATP9AO75110 1047 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 ATG7O95352 703 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 ITGB5P18084 799 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 TCF7P36402 384 aaPredicted RBP8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 SLC26A2P50443 739 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 AP3B2Q13367 1082 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 MTMR1Q13613 665 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 PLPPR4Q7Z2D5 763 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 ADAMTS19Q8TE59 1207 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 KCNB2Q92953 911 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 ZFP91Q96JP5 570 aaPredicted RBP8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 UHRF1Q96T88 793 aaPredicted RBP8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 MXRA8Q9BRK3 442 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 MYL10Q9BUA6 226 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 RIC8AQ9NPQ8 531 aa8.92□□□□□ -0.98
PTCSC3-201ENST00000556013 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 LCHNA4D1U4 455 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 EPOPA6NHQ4 379 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 MEIS1O00470 390 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 ZBTB43O43298 467 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 ARHGEF15O94989 841 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 RB1P06400 928 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 IRX6P78412 446 aaPredicted RBP8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 FUT2Q10981 343 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 SKIV2LQ15477 1246 aaKnown RBP8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 TCTN1Q2MV58 587 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 CEP55Q53EZ4 464 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 UTP14CQ5TAP6 766 aaKnown RBP8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 APOA5Q6Q788 366 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 NIPA1Q7RTP0 329 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 NME8Q8N427 588 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 LMBR1Q8WVP7 490 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 PIBF1Q8WXW3 757 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 CERS4Q9HA82 394 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 KCNH7Q9NS40 1196 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 RWDD3Q9Y3V2 267 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 TANC1Q9C0D5 1861 aa8.91□□□□□ -0.98
PTCSC3-201ENST00000556013 GBF1Q92538 1859 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 H3BNC9 293 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 NCK2O43639 380 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 SORBS3O60504 671 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 CHRNA1P02708 482 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 RXRAP19793 462 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 CLK2P49760 499 aaKnown RBP8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 ARHGAP4P98171 946 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 PPFIA1Q13136 1202 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 RTN1Q16799 776 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 PTPROQ16827 1216 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 PUS10Q3MIT2 529 aaKnown RBP8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 IER5Q5VY09 327 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 MICU3Q86XE3 530 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 MYOCDQ8IZQ8 938 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 CMTR1Q8N1G2 835 aaKnown RBP8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 CCDC82Q8N4S0 544 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 GLG1Q92896 1179 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 SDF4Q9BRK5 362 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 FTHL17Q9BXU8 183 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 IFIH1Q9BYX4 1025 aaKnown RBP8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 AZI2Q9H6S1 392 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 JPH1Q9HDC5 661 aaPredicted RBP8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 BARHL2Q9NY43 387 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 SLC9A2Q9UBY0 812 aa8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 V9GY48 417 aaPredicted RBP8.9□□□□□ -0.98
PTCSC3-201ENST00000556013 KAT6AQ92794 2004 aa8.9□□□□□ -0.99
PTCSC3-201ENST00000556013 KDM3AQ9Y4C1 1321 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 IGKV6D-21A0A0A0MT36 114 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 SMIM35A0A1B0GVV1 85 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 ESYT2A0FGR8 921 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 SMCO2A6NFE2 343 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 C5orf67F2Z3F1 127 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 ENPP3O14638 875 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 CDC45O75419 566 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 CYP3A4P08684 503 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 INSRRP14616 1297 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 GNA11P29992 359 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 SREBF1P36956 1147 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 STAT5BP51692 787 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 NAPAP54920 295 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 MGAT3Q09327 533 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 GRIK4Q16099 956 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 EPC2Q52LR7 807 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 MARCH8Q5T0T0 291 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 WWC2Q6AWC2 1192 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 HEATR3Q7Z4Q2 680 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 RASEFQ8IZ41 740 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 ZNF710Q8N1W2 664 aa8.89□□□□□ -0.99
PTCSC3-201ENST00000556013 MICALL1Q8N3F8 863 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms