RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 PACSIN2Q9UNF0 486 aaPredicted RBP8.51□□□□□ -1.05
CHD8-209ENST00000555935 PPFIA2O75334 1257 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 ECM2O94769 699 aaPredicted RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 ANP32DO95626 131 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 STARD3NLO95772 234 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 VEGFAP15692 232 aaPredicted RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 GCKP35557 465 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 KLHL30Q0D2K2 578 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 PSMD2Q13200 908 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 BZW1Q7L1Q6 419 aaKnown RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 ADGRA1Q86SQ6 560 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 EGFL6Q8IUX8 553 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 RASGEF1CQ8N431 466 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 RASGRP4Q8TDF6 673 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 PGM2Q96G03 612 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 L3MBTL3Q96JM7 780 aaPredicted RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 LRRC27Q9C0I9 530 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 NLRC4Q9NPP4 1024 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 NOC2LQ9Y3T9 749 aaKnown RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 AFF2P51816 1311 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 A0A087X0T9 212 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 BACH1O14867 736 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 NOL4O94818 638 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 GNA14O95837 355 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 MMEP08473 750 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 NUDT17P0C025 328 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 FAM228BP0C875 321 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 CCND1P24385 295 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 ANXA13P27216 316 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 BCAMP50895 628 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 CCNHP51946 323 aaPredicted RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 DHX9Q08211 1270 aaKnown RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 ASIC2Q16515 512 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 HLFQ16534 295 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 CDCA2Q69YH5 1023 aaPredicted RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 TRPM8Q7Z2W7 1104 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 KRT25Q7Z3Z0 450 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 DDX42Q86XP3 938 aaKnown RBP eCLIP8.5□□□□□ -1.05
CHD8-209ENST00000555935 DZIP3Q86Y13 1208 aaKnown RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 ZNF483Q8TF39 744 aaPredicted RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 LMBR1Q8WVP7 490 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 TCP11Q8WWU5 503 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 GPKOWQ92917 476 aaPredicted RBP eCLIP8.5□□□□□ -1.05
CHD8-209ENST00000555935 ANKRD27Q96NW4 1050 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 SH3GL3Q99963 347 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.5□□□□□ -1.05
CHD8-209ENST00000555935 LSM14BQ9BX40 385 aaKnown RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 UTP11Q9Y3A2 253 aaKnown RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 COL4A3BPQ9Y5P4 624 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 MYH3P11055 1940 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 DCDC2CA8MYV0 355 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 KRIT1O00522 736 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 DAPK3O43293 454 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 CLTAP09496 248 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 FLT3P36888 993 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 MMP13P45452 471 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 ZNF131P52739 623 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 POLR2FP61218 127 aaKnown RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 FKBP3Q00688 224 aaKnown RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 SEPT2Q15019 361 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 PPP2R5EQ16537 467 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 PNMA8AQ86V59 439 aaPredicted RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 GBP7Q8N8V2 638 aaPredicted RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 LRRC57Q8N9N7 239 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 SPDL1Q96EA4 605 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 CEP63Q96MT8 703 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 TXLNGYQ9BZA5 131 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 RAB17Q9H0T7 212 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 KCNMB3Q9NPA1 279 aa8.5□□□□□ -1.05
CHD8-209ENST00000555935 CORO1CQ9ULV4 474 aaPredicted RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 BZW2Q9Y6E2 419 aaKnown RBP8.5□□□□□ -1.05
CHD8-209ENST00000555935 CYP2D7A0A087X1C5 515 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 CCDC169A6NNP5 214 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 SMIM22K7EJ46 135 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 LUC7L3O95232 432 aaKnown RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 ZBTB48P10074 688 aaPredicted RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 CHN1P15882 459 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 RAPGEF1Q13905 1077 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 ATXN2LQ8WWM7 1075 aaKnown RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 HPS3Q969F9 1004 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 CNKSR1Q969H4 720 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 SAAL1Q96ER3 474 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 THOC1Q96FV9 657 aaKnown RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 ACSBG1Q96GR2 724 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 FMO2Q99518 471 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 BARHL2Q9NY43 387 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 SUCLA2Q9P2R7 463 aaPredicted RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 ADAMTS1Q9UHI8 967 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 PNMA2Q9UL42 364 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 TTC7AQ9ULT0 858 aaPredicted RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 SMNDC1O75940 238 aaKnown RBP eCLIP8.49□□□□□ -1.05
CHD8-209ENST00000555935 NQO1P15559 274 aaKnown RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 MARSP56192 900 aaKnown RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 CAPRIN2Q6IMN6 1127 aaKnown RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 TBC1D1Q86TI0 1168 aaPredicted RBP8.49□□□□□ -1.05
CHD8-209ENST00000555935 DNAJC10Q8IXB1 793 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 SYCE1Q8N0S2 351 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 METTL13Q8N6R0 699 aa8.49□□□□□ -1.05
CHD8-209ENST00000555935 MDM1Q8TC05 714 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms