RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 DDX41Q9UJV9 622 aaKnown RBP8.57□□□□□ -1.04
PCNX4-211ENST00000555929 SAMM50Q9Y512 469 aa8.57□□□□□ -1.04
PCNX4-211ENST00000555929 NOP56O00567 594 aaKnown RBP8.56□□□□□ -1.04
PCNX4-211ENST00000555929 SEPT4O43236 478 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 GH1P01241 217 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 OR52Z1P0C646 297 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 TGFB3P10600 412 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 RARBP10826 455 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 CCL5P13501 91 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 UBA1P22314 1058 aaKnown RBP8.56□□□□□ -1.04
PCNX4-211ENST00000555929 ICAM3P32942 547 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 TECP42680 631 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 CHMP4BP1P59074 171 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 KRT85P78386 507 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 SEMA3FQ13275 785 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 ITGB3BPQ13352 177 aaPredicted RBP8.56□□□□□ -1.04
PCNX4-211ENST00000555929 TMEM266Q2M3C6 531 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 DUSP28Q4G0W2 176 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 NCAPH2Q6IBW4 605 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 DTHD1Q6ZMT9 781 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 SLFN12Q8IYM2 578 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 OR6J1Q8NGC5 347 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 TNPO1Q92973 898 aaKnown RBP8.56□□□□□ -1.04
PCNX4-211ENST00000555929 LENG9Q96B70 501 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 SPATA33Q96N06 139 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 TEKT3Q9BXF9 490 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 KATNBL1Q9H079 304 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 AP5M1Q9H0R1 490 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 SPC25Q9HBM1 224 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 TBC1D22BQ9NU19 505 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 CFAP45Q9UL16 551 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 PLXNB2O15031 1838 aa8.56□□□□□ -1.04
PCNX4-211ENST00000555929 CASP8AP2Q9UKL3 1982 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 RBM47A0AV96 593 aaKnown RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 VWA3AA6NCI4 1184 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 NKRFO15226 690 aaKnown RBP eCLIP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 SPTLC2O15270 562 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 ADCY6O43306 1168 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 BMP15O95972 392 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 PGK1P00558 417 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 IGHA2P01877 340 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 TFRCP02786 760 aaKnown RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 C6orf222P0C671 652 aaPredicted RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 KCNA2P16389 499 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 ME1P48163 572 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 BEX3Q00994 111 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 ORC2Q13416 577 aaPredicted RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 LAMC2Q13753 1193 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 ZRSR1Q15695 479 aaKnown RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 BRDTQ58F21 947 aaPredicted RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 CELF3Q5SZQ8 465 aaKnown RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 UTP14CQ5TAP6 766 aaKnown RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 MAP3K21Q5TCX8 1036 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 CCDC62Q6P9F0 684 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 TRMT1LQ7Z2T5 733 aaKnown RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 MIER3Q7Z3K6 550 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 TLK2Q86UE8 772 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 C4orf32Q8N8J7 132 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 GIMAP8Q8ND71 665 aaPredicted RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 ETNPPLQ8TBG4 499 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 HAS1Q92839 578 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 SLC5A5Q92911 643 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 KCTD12Q96CX2 325 aaKnown RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 SPATA32Q96LK8 384 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 FAM20AQ96MK3 541 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 MBOAT7Q96N66 472 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 DEFB118Q96PH6 123 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 SENP7Q9BQF6 1050 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 TTC12Q9H892 705 aaPredicted RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 GDPD2Q9HCC8 539 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 JPH1Q9HDC5 661 aaPredicted RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 XPNPEP3Q9NQH7 507 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 SLC9A2Q9UBY0 812 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 DDX20Q9UHI6 824 aaKnown RBP8.55□□□□□ -1.04
PCNX4-211ENST00000555929 PCDHA12Q9UN75 941 aa8.55□□□□□ -1.04
PCNX4-211ENST00000555929 LAD1O00515 517 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 BACH1O14867 736 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 TBX3O15119 743 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 DUSP11O75319 330 aaKnown RBP8.54□□□□□ -1.04
PCNX4-211ENST00000555929 MYL3P08590 195 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 ATP2C1P98194 919 aaPredicted RBP8.54□□□□□ -1.04
PCNX4-211ENST00000555929 SLC39A14Q15043 492 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 PTPAQ15257 358 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 GNASQ5JWF2 1037 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 SPECC1Q5M775 1068 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 COL13A1Q5TAT6 717 aaPredicted RBP8.54□□□□□ -1.04
PCNX4-211ENST00000555929 ATL3Q6DD88 541 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 METTL7BQ6UX53 244 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 LINC00301Q8NCQ3 95 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 AFG1LQ8WV93 481 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 VTI1AQ96AJ9 217 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 ZNF333Q96JL9 665 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 CLIC6Q96NY7 704 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 MTMR9Q96QG7 549 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 RIT2Q99578 217 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 UNC45AQ9H3U1 944 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 KCNMB3Q9NPA1 279 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 POLR3EQ9NVU0 708 aa8.54□□□□□ -1.04
PCNX4-211ENST00000555929 LRWD1Q9UFC0 647 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms