RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 ASIC2Q16515 512 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 HERC4Q5GLZ8 1057 aaPredicted RBP17.8■□□□□ 0.44
TUBB3-209ENST00000555609 MEI1Q5TIA1 1274 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 GPBP1Q86WP2 473 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 TEX2Q8IWB9 1127 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 MREGQ8N565 214 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 ERMNQ8TAM6 284 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 MKL1Q969V6 931 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 DRC1Q96MC2 740 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 SALL4Q9UJQ4 1053 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 KIAA1024Q9UPX6 916 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 TRAF3IP3Q9Y228 551 aa17.8■□□□□ 0.44
TUBB3-209ENST00000555609 CYP11B2P19099 503 aa17.79■□□□□ 0.44
TUBB3-209ENST00000555609 SHMT1P34896 483 aa17.79■□□□□ 0.44
TUBB3-209ENST00000555609 NAP1L1P55209 391 aaKnown RBP17.79■□□□□ 0.44
TUBB3-209ENST00000555609 SKOR1P84550 965 aa17.79■□□□□ 0.44
TUBB3-209ENST00000555609 EN1Q05925 392 aaPredicted RBP17.79■□□□□ 0.44
TUBB3-209ENST00000555609 ADAM9Q13443 819 aa17.79■□□□□ 0.44
TUBB3-209ENST00000555609 DNAJC21Q5F1R6 531 aaKnown RBP17.79■□□□□ 0.44
TUBB3-209ENST00000555609 HHIPL2Q6UWX4 724 aa17.79■□□□□ 0.44
TUBB3-209ENST00000555609 SCFD1Q8WVM8 642 aa17.79■□□□□ 0.44
TUBB3-209ENST00000555609 GANQ9H2C0 597 aa17.79■□□□□ 0.44
TUBB3-209ENST00000555609 TMEM51Q9NW97 253 aa17.79■□□□□ 0.44
TUBB3-209ENST00000555609 FBXL5Q9UKA1 691 aa17.79■□□□□ 0.44
TUBB3-209ENST00000555609 LRRC37AA6NMS7 1700 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 C6orf229H3BNL8 230 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 EPS15P42566 896 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 GTF2IP78347 998 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 KLHL30Q0D2K2 578 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 CD302Q8IX05 232 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 GSPT2Q8IYD1 628 aaKnown RBP17.78■□□□□ 0.44
TUBB3-209ENST00000555609 HDAC7Q8WUI4 952 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 NLRC4Q9NPP4 1024 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 HMGB2P26583 209 aaKnown RBP17.78■□□□□ 0.44
TUBB3-209ENST00000555609 MAGEA9P43362 315 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 SLC12A3P55017 1021 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 PICALMQ13492 652 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 EZH2Q15910 746 aaKnown RBP17.78■□□□□ 0.44
TUBB3-209ENST00000555609 GLIS3Q8NEA6 775 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 PBKQ96KB5 322 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 METTL14Q9HCE5 456 aaKnown RBP17.78■□□□□ 0.44
TUBB3-209ENST00000555609 RBM12Q9NTZ6 932 aaKnown RBP17.78■□□□□ 0.44
TUBB3-209ENST00000555609 USP40Q9NVE5 1235 aa17.78■□□□□ 0.44
TUBB3-209ENST00000555609 GREB1LQ9C091 1923 aaPredicted RBP17.77■□□□□ 0.44
TUBB3-209ENST00000555609 USP17L10C9JJH3 530 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 E9PMD0 336 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 CALUO43852 315 aaPredicted RBP17.77■□□□□ 0.43
TUBB3-209ENST00000555609 PALMO75781 387 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 SSBP05455 408 aaKnown RBP eCLIP17.77■□□□□ 0.43
TUBB3-209ENST00000555609 CORO7P57737 925 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 TNNC1P63316 161 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 Q4G0T1 1027 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 EMC10Q5UCC4 262 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 TTBK2Q6IQ55 1244 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 WHAMMQ8TF30 809 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 TBC1D5Q92609 795 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 CAPS2Q9BXY5 557 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 DHX36Q9H2U1 1008 aaKnown RBP17.77■□□□□ 0.43
TUBB3-209ENST00000555609 NYAP2Q9P242 653 aa17.77■□□□□ 0.43
TUBB3-209ENST00000555609 LTBP1Q14766 1721 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 PDXKO00764 312 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 NCK2O43639 380 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 BUB1O43683 1085 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 FOSP01100 380 aaPredicted RBP17.76■□□□□ 0.43
TUBB3-209ENST00000555609 KRT18P05783 430 aaKnown RBP17.76■□□□□ 0.43
TUBB3-209ENST00000555609 GYS1P13807 737 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 IRAK1P51617 712 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 KCNH2Q12809 1159 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 CDC37Q16543 378 aaPredicted RBP17.76■□□□□ 0.43
TUBB3-209ENST00000555609 SLC51AQ86UW1 340 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 RIN2Q8WYP3 895 aaPredicted RBP17.76■□□□□ 0.43
TUBB3-209ENST00000555609 TAF4BQ92750 862 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 FAM20AQ96MK3 541 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 MRIQ9BWK5 157 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 ANO3Q9BYT9 981 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 RSPH14Q9UHP6 348 aa17.76■□□□□ 0.43
TUBB3-209ENST00000555609 SLC16A3O15427 465 aaKnown RBP17.75■□□□□ 0.43
TUBB3-209ENST00000555609 GFPT2O94808 682 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 CXCR5P32302 372 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 PRKCIP41743 596 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 MATR3P43243 847 aaKnown RBP eCLIP17.75■□□□□ 0.43
TUBB3-209ENST00000555609 ATP2B2Q01814 1243 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 RAPGEF1Q13905 1077 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 BMT2Q1RMZ1 405 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 KIAA0753Q2KHM9 967 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 ANKRD13CQ8N6S4 541 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 SYT2Q8N9I0 419 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-209ENST00000555609 GDAP1L1Q96MZ0 367 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 DDX4Q9NQI0 724 aaKnown RBP17.75■□□□□ 0.43
TUBB3-209ENST00000555609 LCMT1Q9UIC8 334 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 INTUQ9ULD6 942 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 DNM3Q9UQ16 869 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.75■□□□□ 0.43
TUBB3-209ENST00000555609 AFPP02771 609 aaKnown RBP17.75■□□□□ 0.43
TUBB3-209ENST00000555609 RPL13P26373 211 aaKnown RBP17.75■□□□□ 0.43
TUBB3-209ENST00000555609 KLRC1P26715 233 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 RPA1P27694 616 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 EIF6P56537 245 aaKnown RBP17.75■□□□□ 0.43
TUBB3-209ENST00000555609 SLC7A5Q01650 507 aa17.75■□□□□ 0.43
TUBB3-209ENST00000555609 KNOP1Q1ED39 458 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms