RNA–Protein interactions for RNA: ENST00000555503.1

GPHN-208, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-208ENST00000555503 STRIP2Q9ULQ0 834 aa8.31□□□□□ -1.08
GPHN-208ENST00000555503 TMX2Q9Y320 296 aa8.31□□□□□ -1.08
GPHN-208ENST00000555503 TRIM43BA6NCK2 446 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 WDR46O15213 610 aaKnown RBP8.3□□□□□ -1.08
GPHN-208ENST00000555503 SPINT1O43278 529 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 STRNO43815 780 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 PQBP1O60828 265 aaKnown RBP8.3□□□□□ -1.08
GPHN-208ENST00000555503 XYLBO75191 536 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 TLE2Q04725 743 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 WDR44Q5JSH3 913 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 C12orf60Q5U649 245 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 LRRC69Q6ZNQ3 347 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 AMOTL1Q8IY63 956 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 MB21D1Q8N884 522 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 TRIM43Q96BQ3 446 aaPredicted RBP8.3□□□□□ -1.08
GPHN-208ENST00000555503 EAF1Q96JC9 268 aaPredicted RBP8.3□□□□□ -1.08
GPHN-208ENST00000555503 TMEM74Q96NL1 305 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 SH2D4AQ9H788 454 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 SLC5A4Q9NY91 659 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 SIRPGQ9P1W8 387 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 PPM1HQ9ULR3 514 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 SLC4A4Q9Y6R1 1079 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 LAMA4Q16363 1823 aa8.3□□□□□ -1.08
GPHN-208ENST00000555503 MUC3AQ02505 3323 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 ENPP3O14638 875 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 HMMRO75330 724 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 RARBP10826 455 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 ITGB8P26012 769 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 EIF4A3P38919 411 aaKnown RBP8.29□□□□□ -1.08
GPHN-208ENST00000555503 SOX9P48436 509 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 KCTD2Q14681 263 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 SNX17Q15036 470 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 CCDC85BQ15834 202 aaPredicted RBP8.29□□□□□ -1.08
GPHN-208ENST00000555503 TMED8Q6PL24 325 aaPredicted RBP8.29□□□□□ -1.08
GPHN-208ENST00000555503 C16orf86Q6ZW13 317 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.29□□□□□ -1.08
GPHN-208ENST00000555503 MYLIPQ8WY64 445 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 CHMP4CQ96CF2 233 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 CDX2Q99626 313 aaPredicted RBP8.29□□□□□ -1.08
GPHN-208ENST00000555503 TSEN34Q9BSV6 310 aaKnown RBP8.29□□□□□ -1.08
GPHN-208ENST00000555503 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.29□□□□□ -1.08
GPHN-208ENST00000555503 PUS7LQ9H0K6 701 aaKnown RBP8.29□□□□□ -1.08
GPHN-208ENST00000555503 ATP8A2Q9NTI2 1148 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 PPP4R2Q9NY27 417 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 DOCK5Q9H7D0 1870 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 TET1Q8NFU7 2136 aa8.29□□□□□ -1.08
GPHN-208ENST00000555503 COL4A4P53420 1690 aaPredicted RBP8.28□□□□□ -1.08
GPHN-208ENST00000555503 A0A1W2PP55 124 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 A0A1W2PQ45 241 aaPredicted RBP8.28□□□□□ -1.08
GPHN-208ENST00000555503 A0A1W2PQY0 241 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 VWA5AO00534 786 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 CLTBP09497 229 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 ATP5JP18859 108 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 STAT3P40763 770 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 EPHB4P54760 987 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 COL9A2Q14055 689 aaPredicted RBP8.28□□□□□ -1.08
GPHN-208ENST00000555503 PTPROQ16827 1216 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 CTC1Q2NKJ3 1217 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 TSHZ3Q63HK5 1081 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 FAM109BQ6ICB4 259 aaPredicted RBP8.28□□□□□ -1.08
GPHN-208ENST00000555503 CTR9Q6PD62 1173 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 RIOX2Q8IUF8 465 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 ABRAQ8N0Z2 381 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 MAFAQ8NHW3 353 aaPredicted RBP8.28□□□□□ -1.08
GPHN-208ENST00000555503 KCNB2Q92953 911 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 RHOVQ96L33 236 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 RNPC3Q96LT9 517 aaKnown RBP8.28□□□□□ -1.08
GPHN-208ENST00000555503 HAUS7Q99871 368 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 TRIM56Q9BRZ2 755 aaKnown RBP8.28□□□□□ -1.08
GPHN-208ENST00000555503 NT5C1AQ9BXI3 368 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 TTYH1Q9H313 450 aaPredicted RBP8.28□□□□□ -1.08
GPHN-208ENST00000555503 POLMQ9NP87 494 aaPredicted RBP8.28□□□□□ -1.08
GPHN-208ENST00000555503 ZBTB40Q9NUA8 1239 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 ZNF214Q9UL59 606 aaPredicted RBP8.28□□□□□ -1.08
GPHN-208ENST00000555503 PPP1R9AQ9ULJ8 1098 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 PHF24Q9UPV7 400 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 EFR3BQ9Y2G0 817 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 ZBED9Q6R2W3 1325 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 SYNRGQ9UMZ2 1314 aa8.28□□□□□ -1.08
GPHN-208ENST00000555503 MYADML2A6NDP7 307 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 MINDY4BA8MYZ0 360 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 J3QL48 77 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 KLF4O43474 513 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 RAB11FIP3O75154 756 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 CLSTN1O94985 981 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 SLC25A27O95847 323 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 RAG1P15918 1043 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 CES1P23141 567 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 GBP2P32456 591 aaPredicted RBP8.27□□□□□ -1.09
GPHN-208ENST00000555503 ETFBP38117 255 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 ZNF792Q3KQV3 632 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 PEAR1Q5VY43 1037 aaPredicted RBP8.27□□□□□ -1.09
GPHN-208ENST00000555503 SNRNP48Q6IEG0 339 aaKnown RBP8.27□□□□□ -1.09
GPHN-208ENST00000555503 ANKS3Q6ZW76 656 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 RNF180Q86T96 592 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 ZNF598Q86UK7 904 aaKnown RBP8.27□□□□□ -1.09
GPHN-208ENST00000555503 RPAP2Q8IXW5 612 aaPredicted RBP8.27□□□□□ -1.09
GPHN-208ENST00000555503 CPXCR1Q8N123 301 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 REPS2Q8NFH8 660 aa8.27□□□□□ -1.09
GPHN-208ENST00000555503 KIFC2Q96AC6 838 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms