RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ZNF76P36508 570 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 GPNMBQ14956 572 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 TRIM71Q2Q1W2 868 aaKnown RBP15.58■□□□□ 0.08
SNX6-203ENST00000555416 FAM109BQ6ICB4 259 aaPredicted RBP15.58■□□□□ 0.08
SNX6-203ENST00000555416 ZNF365Q70YC5 407 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 NIPA1Q7RTP0 329 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 PLA2G4DQ86XP0 818 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 BLIDQ8IZY5 108 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 GIMAP8Q8ND71 665 aaPredicted RBP15.58■□□□□ 0.08
SNX6-203ENST00000555416 LENG9Q96B70 501 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 C22orf23Q9BZE7 217 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 RNPEPQ9H4A4 650 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 IL23AQ9NPF7 189 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 ORC3Q9UBD5 711 aaPredicted RBP15.58■□□□□ 0.08
SNX6-203ENST00000555416 STK36Q9NRP7 1315 aa15.58■□□□□ 0.08
SNX6-203ENST00000555416 DDX39AO00148 427 aaKnown RBP15.57■□□□□ 0.08
SNX6-203ENST00000555416 RBM25P49756 843 aaKnown RBP15.57■□□□□ 0.08
SNX6-203ENST00000555416 DAGLBQ8NCG7 672 aa15.57■□□□□ 0.08
SNX6-203ENST00000555416 NSUN7Q8NE18 718 aaKnown RBP15.57■□□□□ 0.08
SNX6-203ENST00000555416 BICD2Q8TD16 824 aa15.57■□□□□ 0.08
SNX6-203ENST00000555416 OXER1Q8TDS5 423 aa15.57■□□□□ 0.08
SNX6-203ENST00000555416 SEPT1Q8WYJ6 367 aa15.57■□□□□ 0.08
SNX6-203ENST00000555416 RNPC3Q96LT9 517 aaKnown RBP15.57■□□□□ 0.08
SNX6-203ENST00000555416 PHF20Q9BVI0 1012 aa15.57■□□□□ 0.08
SNX6-203ENST00000555416 JPH1Q9HDC5 661 aaPredicted RBP15.57■□□□□ 0.08
SNX6-203ENST00000555416 SETD4Q9NVD3 440 aa15.57■□□□□ 0.08
SNX6-203ENST00000555416 SLC9A2Q9UBY0 812 aa15.57■□□□□ 0.08
SNX6-203ENST00000555416 NOD1Q9Y239 953 aa15.57■□□□□ 0.08
SNX6-203ENST00000555416 NFASCO94856 1347 aa15.57■□□□□ 0.08
SNX6-203ENST00000555416 TREHO43280 583 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 CDKL5O76039 1030 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 MARK3P27448 753 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 CIITAP33076 1130 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 ACTR2P61160 394 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 PRR16Q569H4 304 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 RASIP1Q5U651 963 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 MCTP2Q6DN12 878 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 TRAF7Q6Q0C0 670 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 Q7L0L9 218 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 DEFB128Q7Z7B8 93 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 TBCKQ8TEA7 893 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 GJA10Q969M2 543 aa15.56■□□□□ 0.08
SNX6-203ENST00000555416 CXXC1Q9P0U4 656 aaPredicted RBP15.56■□□□□ 0.08
SNX6-203ENST00000555416 TET1Q8NFU7 2136 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 TANC1Q9C0D5 1861 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 GRXCR1A8MXD5 290 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 LGR5O75473 907 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 IQCF3P0C7M6 154 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 CKBP12277 381 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 FOSBP53539 338 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 ADAM17P78536 824 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 PTK7Q13308 1070 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 TCTN1Q2MV58 587 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 EARS2Q5JPH6 523 aaKnown RBP15.55■□□□□ 0.08
SNX6-203ENST00000555416 OTOP2Q7RTS6 562 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 SERINC5Q86VE9 423 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 LMBR1Q8WVP7 490 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 ZBTB10Q96DT7 871 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 SDF4Q9BRK5 362 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 OSBPL7Q9BZF2 842 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 LIMCH1Q9UPQ0 1083 aa15.55■□□□□ 0.08
SNX6-203ENST00000555416 C17orf102A2RUQ5 167 aa15.54■□□□□ 0.08
SNX6-203ENST00000555416 FAM205CA6NFA0 338 aa15.54■□□□□ 0.08
SNX6-203ENST00000555416 IPO5O00410 1097 aaKnown RBP15.54■□□□□ 0.08
SNX6-203ENST00000555416 ATG7O95352 703 aa15.54■□□□□ 0.08
SNX6-203ENST00000555416 TDP2O95551 362 aa15.54■□□□□ 0.08
SNX6-203ENST00000555416 RBL2Q08999 1139 aa15.54■□□□□ 0.08
SNX6-203ENST00000555416 MBTPS1Q14703 1052 aa15.54■□□□□ 0.08
SNX6-203ENST00000555416 ZNF618Q5T7W0 954 aa15.54■□□□□ 0.08
SNX6-203ENST00000555416 CCDC83Q8IWF9 413 aa15.54■□□□□ 0.08
SNX6-203ENST00000555416 HERVK_113Q902F9 699 aa15.54■□□□□ 0.08
SNX6-203ENST00000555416 ATP6V0A1Q93050 837 aa15.54■□□□□ 0.08
SNX6-203ENST00000555416 ZNF577Q9BSK1 485 aa15.54■□□□□ 0.08
SNX6-203ENST00000555416 EMSYQ7Z589 1322 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 MSH4O15457 936 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 NBNO60934 754 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 CD2BP2O95400 341 aaKnown RBP15.53■□□□□ 0.08
SNX6-203ENST00000555416 FGBP02675 491 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 USP11P51784 963 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 BFSP2Q13515 415 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 INF2Q27J81 1249 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 ABHD15Q6UXT9 468 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 RUFY4Q6ZNE9 571 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 LRRC8DQ7L1W4 858 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 RETREG2Q8NC44 543 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 CAGE1Q8TC20 777 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 GLG1Q92896 1179 aa15.53■□□□□ 0.08
SNX6-203ENST00000555416 ZNF215Q9UL58 517 aaPredicted RBP15.53■□□□□ 0.08
SNX6-203ENST00000555416 IGKV6D-21A0A0A0MT36 114 aa15.52■□□□□ 0.08
SNX6-203ENST00000555416 SELPP16109 830 aa15.52■□□□□ 0.08
SNX6-203ENST00000555416 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.08
SNX6-203ENST00000555416 NR5A1Q13285 461 aa15.52■□□□□ 0.08
SNX6-203ENST00000555416 PLCB4Q15147 1175 aa15.52■□□□□ 0.08
SNX6-203ENST00000555416 MARCH8Q5T0T0 291 aa15.52■□□□□ 0.08
SNX6-203ENST00000555416 GALNT17Q6IS24 598 aa15.52■□□□□ 0.08
SNX6-203ENST00000555416 PSRC1Q6PGN9 363 aaPredicted RBP15.52■□□□□ 0.08
SNX6-203ENST00000555416 CCDC60Q8IWA6 550 aaPredicted RBP15.52■□□□□ 0.08
SNX6-203ENST00000555416 FAM177A1Q8N128 213 aaPredicted RBP15.52■□□□□ 0.08
SNX6-203ENST00000555416 AFAP1L1Q8TED9 768 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms