RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 MYL3P08590 195 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 NCLP19338 710 aaKnown RBP12.31□□□□□ -0.44
SHMT2-218ENST00000555213 ACLYP53396 1101 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 KRT76Q01546 638 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 ITGB3BPQ13352 177 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-218ENST00000555213 SF3A1Q15459 793 aaKnown RBP12.31□□□□□ -0.44
SHMT2-218ENST00000555213 KCNA10Q16322 511 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 AXDND1Q5T1B0 1012 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-218ENST00000555213 LRCH2Q5VUJ6 765 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 SLFN12Q8IYM2 578 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 C4orf32Q8N8J7 132 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 SPATA32Q96LK8 384 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 FAM20AQ96MK3 541 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 MTG1Q9BT17 334 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-218ENST00000555213 KATNAL1Q9BW62 490 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 TEKT3Q9BXF9 490 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 ZNF215Q9UL58 517 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-218ENST00000555213 PCDHB6Q9Y5E3 794 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 MYH7BA7E2Y1 1941 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 PDE4DIPQ5VU43 2346 aa12.31□□□□□ -0.44
SHMT2-218ENST00000555213 A0A1W2PQ45 241 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-218ENST00000555213 A0A1W2PQY0 241 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 DDX39AO00148 427 aaKnown RBP12.3□□□□□ -0.44
SHMT2-218ENST00000555213 CTAGE5O15320 804 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 ATP9AO75110 1047 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 PPFIA4O75335 1185 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 YEATS4O95619 227 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 PTGS1P23219 599 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 MCM7P33993 719 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 CALCRLQ16602 461 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 KLHL40Q2TBA0 621 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 SKOR2Q2VWA4 1001 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-218ENST00000555213 HSDL1Q3SXM5 330 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 PRPF38BQ5VTL8 546 aaKnown RBP12.3□□□□□ -0.44
SHMT2-218ENST00000555213 ZNF746Q6NUN9 644 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-218ENST00000555213 CXCL17Q6UXB2 119 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 POTEDQ86YR6 584 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 SMAP1Q8IYB5 467 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-218ENST00000555213 DIS3LQ8TF46 1054 aaKnown RBP12.3□□□□□ -0.44
SHMT2-218ENST00000555213 SLC5A5Q92911 643 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 VTI1AQ96AJ9 217 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 PAWRQ96IZ0 340 aaKnown RBP12.3□□□□□ -0.44
SHMT2-218ENST00000555213 GPR20Q99678 358 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 AZI2Q9H6S1 392 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 STARD7Q9NQZ5 370 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.3□□□□□ -0.44
SHMT2-218ENST00000555213 PCDHA7Q9UN72 937 aa12.3□□□□□ -0.44
SHMT2-218ENST00000555213 WDR64B1ANS9 1081 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 BMP15O95972 392 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 COL6A1P12109 1028 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 HOXD8P13378 290 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-218ENST00000555213 PTMSP20962 102 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 SFNP31947 248 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 JAK3P52333 1124 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 ACTR2P61160 394 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 UBE2HP62256 183 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 PURAQ00577 322 aaKnown RBP12.29□□□□□ -0.44
SHMT2-218ENST00000555213 CCSAPQ6IQ19 270 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-218ENST00000555213 MIS18BP1Q6P0N0 1132 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 ETNPPLQ8TBG4 499 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 SEPT1Q8WYJ6 367 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 FERMT2Q96AC1 680 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 HTATIP2Q9BUP3 242 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 SEZ6LQ9BYH1 1024 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 SENP6Q9GZR1 1112 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-218ENST00000555213 KCNMB3Q9NPA1 279 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 SAMM50Q9Y512 469 aa12.29□□□□□ -0.44
SHMT2-218ENST00000555213 MORC2Q9Y6X9 1032 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-218ENST00000555213 A0A0U1RQG5 324 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-218ENST00000555213 LAD1O00515 517 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 BACH1O14867 736 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 SPTLC2O15270 562 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 CHMP2AO43633 222 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 F2P00734 622 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 LGALS2P05162 132 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 PSAPP07602 524 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 OR52Z1P0C646 297 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 ZNF286BP0CG31 522 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 LIG1P18858 919 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 TCF7P36402 384 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-218ENST00000555213 MNX1P50219 401 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-218ENST00000555213 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-218ENST00000555213 ZNF174Q15697 407 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 TMEM266Q2M3C6 531 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 FAM160B1Q5W0V3 765 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 RDM1Q8NG50 284 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 GLG1Q92896 1179 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 UIMC1Q96RL1 719 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 CEP131Q9UPN4 1083 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 MROH7Q68CQ1 1323 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 EMSYQ7Z589 1322 aa12.28□□□□□ -0.44
SHMT2-218ENST00000555213 DHX15O43143 795 aaKnown RBP12.27□□□□□ -0.45
SHMT2-218ENST00000555213 PPP6R2O75170 966 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 PSMD10O75832 226 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 CCNE2O96020 404 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 SUPT20HL2P0C7V6 817 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 CHMP4BP1P59074 171 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 GRIN1Q05586 938 aa12.27□□□□□ -0.45
SHMT2-218ENST00000555213 IL17AQ16552 155 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms