RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 BTDP43251 543 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 ERVK-24P63145 666 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 ATP2B2Q01814 1243 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 PCDH1Q08174 1060 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 CCL14Q16627 93 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 SLC39A5Q6ZMH5 540 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 DZIP1Q86YF9 867 aaKnown RBP5.96□□□□□ -1.46
ATXN3-229ENST00000554672 KRTAP19-1Q8IUB9 90 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 FBLIM1Q8WUP2 373 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 ATXN2LQ8WWM7 1075 aaKnown RBP5.96□□□□□ -1.46
ATXN3-229ENST00000554672 BADQ92934 168 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 APBA2Q99767 749 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 CWC22Q9HCG8 908 aaKnown RBP5.96□□□□□ -1.46
ATXN3-229ENST00000554672 CYP4F12Q9HCS2 524 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 GINM1Q9NU53 330 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 ABCF2Q9UG63 623 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 DDX20Q9UHI6 824 aaKnown RBP5.96□□□□□ -1.46
ATXN3-229ENST00000554672 HERC5Q9UII4 1024 aaKnown RBP5.96□□□□□ -1.46
ATXN3-229ENST00000554672 USTQ9Y2C2 406 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 ATP11BQ9Y2G3 1177 aa5.96□□□□□ -1.46
ATXN3-229ENST00000554672 COL2A1P02458 1487 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-229ENST00000554672 ECM29Q5VYK3 1845 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-229ENST00000554672 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-229ENST00000554672 SLC15A5A6NIM6 579 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 H3BRB1 525 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 PEX10O60683 326 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 ECEL1O95672 775 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 ASNSP08243 561 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 CNGA1P29973 690 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 ADMP35318 185 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 GRIK1P39086 918 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 RFX5P48382 616 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-229ENST00000554672 RHBDL3P58872 404 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 CCNA1P78396 465 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 SOX4Q06945 474 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-229ENST00000554672 RRP1BQ14684 758 aaKnown RBP5.95□□□□□ -1.46
ATXN3-229ENST00000554672 ATP2B3Q16720 1220 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 ATG9AQ7Z3C6 839 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 FOXP4Q8IVH2 680 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-229ENST00000554672 TRIM56Q9BRZ2 755 aaKnown RBP5.95□□□□□ -1.46
ATXN3-229ENST00000554672 USP44Q9H0E7 712 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 PORCNQ9H237 461 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 CLEC4MQ9H2X3 399 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-229ENST00000554672 TUT1Q9H6E5 874 aaKnown RBP5.95□□□□□ -1.46
ATXN3-229ENST00000554672 LIN7BQ9HAP6 207 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 PRDM5Q9NQX1 630 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-229ENST00000554672 PI4KBQ9UBF8 816 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 RAPGEFL1Q9UHV5 662 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 RABGAP1Q9Y3P9 1069 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 TACC3Q9Y6A5 838 aa5.95□□□□□ -1.46
ATXN3-229ENST00000554672 ARAP2Q8WZ64 1704 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 FAM95CA0A1B0GW59 222 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 CIAO1O76071 339 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 HOXC6P09630 235 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 MAOBP27338 520 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 IL15P40933 162 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-229ENST00000554672 PHKA1P46020 1223 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 GSTO1P78417 241 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 MRPS5P82675 430 aaKnown RBP5.94□□□□□ -1.46
ATXN3-229ENST00000554672 MAP3K12Q12852 859 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 ORC1Q13415 861 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 GJC2Q5T442 439 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-229ENST00000554672 KIAA0319Q5VV43 1072 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 FBXL6Q8N531 539 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 USP38Q8NB14 1042 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 GATA6Q92908 595 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 RNPC3Q96LT9 517 aaKnown RBP5.94□□□□□ -1.46
ATXN3-229ENST00000554672 ASB2Q96Q27 587 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 FAM129BQ96TA1 746 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 PAGR1Q9BTK6 254 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 C1QTNF1Q9BXJ1 281 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 DHX36Q9H2U1 1008 aaKnown RBP5.94□□□□□ -1.46
ATXN3-229ENST00000554672 FLRT1Q9NZU1 646 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 BRPF3Q9ULD4 1205 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 MROH7-TTC4A0A0A0MT08 1334 aa5.94□□□□□ -1.46
ATXN3-229ENST00000554672 PDS5AQ29RF7 1337 aaKnown RBP5.94□□□□□ -1.46
ATXN3-229ENST00000554672 RFX7Q2KHR2 1363 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 TRIM43BA6NCK2 446 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 KBTBD13C9JR72 458 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 CYP2C19P33261 490 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 MECOMQ03112 1051 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 TLE2Q04725 743 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 SNX17Q15036 470 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 NFKBIBQ15653 356 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 TRIM60Q495X7 471 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 AKNAD1Q5T1N1 836 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 WDR78Q5VTH9 848 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 GLYCTKQ8IVS8 523 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 EZH1Q92800 747 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-229ENST00000554672 TRIM43Q96BQ3 446 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-229ENST00000554672 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 ZNF576Q9H609 170 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 PDLIM7Q9NR12 457 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 IVNS1ABPQ9Y6Y0 642 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 UNC80Q8N2C7 3258 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 MYH3P11055 1940 aa5.93□□□□□ -1.46
ATXN3-229ENST00000554672 SPEF2Q9C093 1822 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 KIAA0355O15063 1070 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms