RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SEC31BQ9NQW1 1179 aa15.08■□□□□ 0
VTI1B-204ENST00000554659 ADCY1Q08828 1119 aa15.08■□□□□ 0
VTI1B-204ENST00000554659 STRBPQ96SI9 672 aaKnown RBP15.08■□□□□ 0
VTI1B-204ENST00000554659 SUGCTQ9HAC7 445 aa15.08■□□□□ 0
VTI1B-204ENST00000554659 UBE2TQ9NPD8 197 aaPredicted RBP15.08■□□□□ 0
VTI1B-204ENST00000554659 TCP10L2B9ZVM9 353 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 RCAN1P53805 252 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 ALCAMQ13740 583 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 TFDP1Q14186 410 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 MCF2LO15068 1137 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 SLCO1A2P46721 670 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 KCTD1Q719H9 257 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 DGKHQ86XP1 1220 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 DCLK2Q8N568 766 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 PDCD7Q8N8D1 485 aaKnown RBP15.07■□□□□ 0
VTI1B-204ENST00000554659 JPH2Q9BR39 696 aaPredicted RBP15.07■□□□□ 0
VTI1B-204ENST00000554659 BRIP1Q9BX63 1249 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 KMT5AQ9NQR1 393 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 NCAPD2Q15021 1401 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 ANKARQ7Z5J8 1434 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 PFDN6O15212 129 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 GUCY2CP25092 1073 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 DOK7Q18PE1 504 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 PPWD1Q96BP3 646 aaKnown RBP15.07■□□□□ 0
VTI1B-204ENST00000554659 MXI1P50539 228 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 RASGRF1Q13972 1273 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 E2F4Q16254 413 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 UNC13DQ70J99 1090 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 TMC4Q7Z404 712 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 AP1M1Q9BXS5 423 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 SERPINB13Q9UIV8 391 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 ABCA8O94911 1581 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 MT-ND3P03897 115 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 POLE2P56282 527 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 PRPSAP1Q14558 356 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 HIBCHQ6NVY1 386 aaPredicted RBP15.07■□□□□ 0
VTI1B-204ENST00000554659 COA7Q96BR5 231 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 HDAC11Q96DB2 347 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 CEP72Q9P209 647 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 GDAQ9Y2T3 454 aa15.07■□□□□ 0
VTI1B-204ENST00000554659 CPP00450 1065 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 ECE1P42892 770 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 CCDC144BQ3MJ40 725 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 ADAMTS1Q9UHI8 967 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 IPO11Q9UI26 975 aaKnown RBP15.06■□□□□ 0
VTI1B-204ENST00000554659 PLAAQ9Y263 795 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 EXOC1LA0A1B0GW35 172 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 MYO1CO00159 1063 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 PODXLO00592 558 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 SEPT9Q9UHD8 586 aaPredicted RBP15.06■□□□□ 0
VTI1B-204ENST00000554659 DNAJC24Q6P3W2 148 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 ANKRD36BP1Q96IX9 119 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 MTA3Q9BTC8 594 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 ESRRGP62508 458 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 ANKRD20A4Q4UJ75 823 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 ANKRD20A8PQ5CZ79 823 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 ANKRD20A2Q5SQ80 823 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 ANKRD20A1Q5TYW2 823 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 PROM2Q8N271 834 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
VTI1B-204ENST00000554659 ROBO2Q9HCK4 1378 aa15.05■□□□□ 0
VTI1B-204ENST00000554659 ERBB3P21860 1342 aa15.05■□□□□ 0
VTI1B-204ENST00000554659 MEIS1O00470 390 aa15.05■□□□□ 0
VTI1B-204ENST00000554659 PLEKHA8P1O95397 391 aa15.05■□□□□ 0
VTI1B-204ENST00000554659 PRKG1Q13976 671 aa15.05■□□□□ 0
VTI1B-204ENST00000554659 PDCD2Q16342 344 aaPredicted RBP15.05■□□□□ 0
VTI1B-204ENST00000554659 LCA5Q86VQ0 697 aa15.05■□□□□ 0
VTI1B-204ENST00000554659 SLC7A3Q8WY07 619 aa15.05■□□□□ 0
VTI1B-204ENST00000554659 SPDYE16A6NNV3 312 aaPredicted RBP15.05■□□□□ -0
VTI1B-204ENST00000554659 TRPA1O75762 1119 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 RWDD2BP57060 319 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 TAF11Q15544 211 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 MUM1L1Q5H9M0 696 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 USP17L2Q6R6M4 530 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 TADA2BQ86TJ2 420 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 FLAD1Q8NFF5 587 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 CALR3Q96L12 384 aaKnown RBP15.05■□□□□ -0
VTI1B-204ENST00000554659 CCDC68Q9H2F9 335 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 EPS15L1Q9UBC2 864 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 SCOCQ9UIL1 159 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 PNMA6FA0A0J9YX94 578 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 SKIP12755 728 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 PCIF1Q9H4Z3 704 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 CSADQ9Y600 493 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 SLC16A2P36021 539 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 MCAMP43121 646 aa15.05■□□□□ -0
VTI1B-204ENST00000554659 PRR36Q9H6K5 1346 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 ESYT2A0FGR8 921 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 MIF4GDA9UHW6 222 aaKnown RBP15.04■□□□□ -0
VTI1B-204ENST00000554659 FGGP02679 453 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 USP17L8P0C7I0 530 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 BMP3P12645 472 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 TMED8Q6PL24 325 aaPredicted RBP15.04■□□□□ -0
VTI1B-204ENST00000554659 MMS22LQ6ZRQ5 1243 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 MXD3Q9BW11 206 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 SMYD2Q9NRG4 433 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 MED7O43513 233 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 PALMO75781 387 aa15.04■□□□□ -0
VTI1B-204ENST00000554659 PLCB4Q15147 1175 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms