RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SPICE1Q8N0Z3 855 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 HYOU1Q9Y4L1 999 aa17.3■□□□□ 0.36
ARHGEF40-203ENST00000554514 ARHGAP4P98171 946 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 ICA1Q05084 483 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 ARSHQ5FYA8 562 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 LEKR1Q6ZMV7 388 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 SND1Q7KZF4 910 aaKnown RBP eCLIP17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 NOX5Q96PH1 765 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 CEP72Q9P209 647 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 TARSL2A2RTX5 802 aaKnown RBP17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 SYF2O95926 243 aaKnown RBP17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 NR2F2P24468 414 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 CATSPER3Q86XQ3 398 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 GOLGA6L1Q8N7Z2 621 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 PACSIN1Q9BY11 444 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 ADAMTS1Q9UHI8 967 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 ABCB11O95342 1321 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 FOCADQ5VW36 1801 aa17.29■□□□□ 0.36
ARHGEF40-203ENST00000554514 DCAF17Q5H9S7 520 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF40-203ENST00000554514 SUGT1Q9Y2Z0 365 aa17.28■□□□□ 0.36
ARHGEF40-203ENST00000554514 PCDHA2Q9Y5H9 948 aa17.28■□□□□ 0.36
ARHGEF40-203ENST00000554514 MEIS2O14770 477 aa17.28■□□□□ 0.36
ARHGEF40-203ENST00000554514 PRPF6O94906 941 aaKnown RBP17.28■□□□□ 0.36
ARHGEF40-203ENST00000554514 TCERG1LQ5VWI1 586 aa17.28■□□□□ 0.36
ARHGEF40-203ENST00000554514 SFR1Q86XK3 245 aa17.28■□□□□ 0.36
ARHGEF40-203ENST00000554514 CYP2W1Q8TAV3 490 aa17.28■□□□□ 0.36
ARHGEF40-203ENST00000554514 DHX36Q9H2U1 1008 aaKnown RBP17.28■□□□□ 0.36
ARHGEF40-203ENST00000554514 KCNMB3Q9NPA1 279 aa17.28■□□□□ 0.36
ARHGEF40-203ENST00000554514 RSPH10B2B2RC85 870 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 PALMO75781 387 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 LCA5LO95447 670 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 RSPH10BP0C881 870 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 PAFAH1B1P43034 410 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 KLHL30Q0D2K2 578 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 KCNH2Q12809 1159 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 ASTE1Q2TB18 679 aaPredicted RBP17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 HHIPL2Q6UWX4 724 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 TLR10Q9BXR5 811 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 SPDYE3A6NKU9 549 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 SFI1A8K8P3 1242 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 F5H6K3 240 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 SERPING1P05155 500 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 ACTN2P35609 894 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 KLRC3Q07444 240 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 KLHDC7AQ5VTJ3 777 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 SH3BP5LQ7L8J4 393 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 TRIM59Q8IWR1 403 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 CCDC17Q96LX7 622 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 KCTD10Q9H3F6 313 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 MED4Q9NPJ6 270 aa17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 RBM12Q9NTZ6 932 aaKnown RBP17.27■□□□□ 0.36
ARHGEF40-203ENST00000554514 A0A087X0T9 212 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 FAM86B1E9PN63 330 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 CETN3O15182 167 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 FAM86B2P0C5J1 330 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 FAM228BP0C875 321 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 MYBP10242 640 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 TCP1P17987 556 aaKnown RBP17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 KLRC1P26715 233 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 ZNF76P36508 570 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 SLC12A3P55017 1021 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 KCTD19Q17RG1 926 aaPredicted RBP17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 FOXR1Q6PIV2 292 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 REEP2Q9BRK0 252 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 FAM198AQ9UFP1 575 aa17.27■□□□□ 0.35
ARHGEF40-203ENST00000554514 ARFGEF1Q9Y6D6 1849 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 KLRG2A4D1S0 409 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 NPR1P16066 1061 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 SLC9A1P19634 815 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 KIAA0753Q2KHM9 967 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 CEP63Q96MT8 703 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 HDAC9Q9UKV0 1011 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 CLIC2O15247 247 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 CHMP2AO43633 222 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 USP11P51784 963 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 HYIQ5T013 277 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 HAUS3Q68CZ6 603 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 FBXO11Q86XK2 927 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 AFAP1L1Q8TED9 768 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 AMNQ9BXJ7 453 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 IKZF4Q9H2S9 585 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 GOLPH3Q9H4A6 298 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 PSD3Q9NYI0 1048 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 DNM3Q9UQ16 869 aa17.26■□□□□ 0.35
ARHGEF40-203ENST00000554514 SSU72P8A0A1W2PR75 194 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 UBXN2AP68543 259 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 ASIC2Q16515 512 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 SLC27A3Q5K4L6 730 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 C8orf74Q6P047 294 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 SIAH1Q8IUQ4 282 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 SLFN12Q8IYM2 578 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 GOLGA5Q8TBA6 731 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 BHMT2Q9H2M3 363 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 RGL1Q9NZL6 768 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 PI4KBQ9UBF8 816 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 ESYT3A0FGR9 886 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 GOLGA6BA6NDN3 693 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 NDUFB10O96000 172 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 MAPK8IP2Q13387 824 aaPredicted RBP17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 GIT2Q14161 759 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms