RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 PHOSPHO2Q8TCD6 241 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 BICD2Q8TD16 824 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 ATP6V0A1Q93050 837 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 SLC9A7Q96T83 725 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 ZNF576Q9H609 170 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 PCDHA11Q9Y5I1 949 aa9.96□□□□□ -0.82
ACTN1-213ENST00000554508 MICAL3Q7RTP6 2002 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 EFCAB14O75071 495 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 CYP3A4P08684 503 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 ANAPC15P60006 121 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 CCT2P78371 535 aaKnown RBP9.95□□□□□ -0.82
ACTN1-213ENST00000554508 SP4Q02446 784 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 HIC1Q14526 733 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 GPNMBQ14956 572 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 ZNF618Q5T7W0 954 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 JAKMIP3Q5VZ66 844 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 CNKSR3Q6P9H4 555 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 CPLX2Q6PUV4 134 aaKnown RBP9.95□□□□□ -0.82
ACTN1-213ENST00000554508 TRIM22Q8IYM9 498 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 REXO1Q8N1G1 1221 aaKnown RBP9.95□□□□□ -0.82
ACTN1-213ENST00000554508 MYLIPQ8WY64 445 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 TNPO1Q92973 898 aaKnown RBP9.95□□□□□ -0.82
ACTN1-213ENST00000554508 PHKBQ93100 1093 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 PGBD1Q96JS3 809 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 SDF4Q9BRK5 362 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 SMARCAD1Q9H4L7 1026 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 SLC28A3Q9HAS3 691 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 JPH1Q9HDC5 661 aaPredicted RBP9.95□□□□□ -0.82
ACTN1-213ENST00000554508 SH3GLB2Q9NR46 395 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 PDRG1Q9NUG6 133 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 SETD4Q9NVD3 440 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 TMEM260Q9NX78 707 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 ERAP1Q9NZ08 941 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 SLC9A2Q9UBY0 812 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 EMSYQ7Z589 1322 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 NRCAMQ92823 1304 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 EVPLQ92817 2033 aa9.95□□□□□ -0.82
ACTN1-213ENST00000554508 CDH23Q9H251 3354 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 LOXHD1Q8IVV2 1947 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 ABHD14A-ACY1A0A1B0GW23 586 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 RRN3P2A6NIE6 340 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 RSPH10B2B2RC85 870 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 KIF28PB7ZC32 967 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 CPLX1O14810 134 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 TREHO43280 583 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 NBNO60934 754 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 LGR5O75473 907 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 RSPH10BP0C881 870 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 ARP10275 920 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 FOSL2P15408 326 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 THPOP40225 353 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 KCNJ6P48051 423 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 ADAM17P78536 824 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 ARHGAP4P98171 946 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 SSRP1Q08945 709 aaKnown RBP9.94□□□□□ -0.82
ACTN1-213ENST00000554508 IKBKEQ14164 716 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 GRIN2CQ14957 1233 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 TRAF7Q6Q0C0 670 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 TRIM50Q86XT4 487 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 FAM177A1Q8N128 213 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-213ENST00000554508 CYP2W1Q8TAV3 490 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 CRYGNQ8WXF5 182 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 GLG1Q92896 1179 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 WNT8BQ93098 351 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 GAS2L1Q99501 681 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-213ENST00000554508 SLC26A6Q9BXS9 759 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 NKX2-4Q9H2Z4 354 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 AZI2Q9H6S1 392 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 AGO4Q9HCK5 861 aaKnown RBP9.94□□□□□ -0.82
ACTN1-213ENST00000554508 PKD2L1Q9P0L9 805 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 TELO2Q9Y4R8 837 aa9.94□□□□□ -0.82
ACTN1-213ENST00000554508 ATG7O95352 703 aa9.93□□□□□ -0.82
ACTN1-213ENST00000554508 DEXIO95424 95 aa9.93□□□□□ -0.82
ACTN1-213ENST00000554508 RPLP2P05387 115 aaKnown RBP9.93□□□□□ -0.82
ACTN1-213ENST00000554508 RABGGTBP53611 331 aa9.93□□□□□ -0.82
ACTN1-213ENST00000554508 PPFIA1Q13136 1202 aa9.93□□□□□ -0.82
ACTN1-213ENST00000554508 PLPPR4Q7Z2D5 763 aa9.93□□□□□ -0.82
ACTN1-213ENST00000554508 RPAINQ86UA6 219 aa9.93□□□□□ -0.82
ACTN1-213ENST00000554508 PLA2G4DQ86XP0 818 aa9.93□□□□□ -0.82
ACTN1-213ENST00000554508 MAFAQ8NHW3 353 aaPredicted RBP9.93□□□□□ -0.82
ACTN1-213ENST00000554508 LMBR1Q8WVP7 490 aa9.93□□□□□ -0.82
ACTN1-213ENST00000554508 C22orf23Q9BZE7 217 aa9.93□□□□□ -0.82
ACTN1-213ENST00000554508 UPF3BQ9BZI7 483 aaKnown RBP9.93□□□□□ -0.82
ACTN1-213ENST00000554508 NCOA5Q9HCD5 579 aaKnown RBP9.93□□□□□ -0.82
ACTN1-213ENST00000554508 TBC1D22BQ9NU19 505 aa9.93□□□□□ -0.82
ACTN1-213ENST00000554508 YBX2Q9Y2T7 364 aaKnown RBP9.93□□□□□ -0.82
ACTN1-213ENST00000554508 IGLV3-22A0A075B6J6 115 aa9.92□□□□□ -0.82
ACTN1-213ENST00000554508 FAM86B1E9PN63 330 aa9.92□□□□□ -0.82
ACTN1-213ENST00000554508 CDKL5O76039 1030 aa9.92□□□□□ -0.82
ACTN1-213ENST00000554508 FAM86B2P0C5J1 330 aa9.92□□□□□ -0.82
ACTN1-213ENST00000554508 CIITAP33076 1130 aa9.92□□□□□ -0.82
ACTN1-213ENST00000554508 SLC26A2P50443 739 aa9.92□□□□□ -0.82
ACTN1-213ENST00000554508 STAT5BP51692 787 aa9.92□□□□□ -0.82
ACTN1-213ENST00000554508 USP11P51784 963 aa9.92□□□□□ -0.82
ACTN1-213ENST00000554508 NLRP5P59047 1200 aa9.92□□□□□ -0.82
ACTN1-213ENST00000554508 ACTR2P61160 394 aa9.92□□□□□ -0.82
ACTN1-213ENST00000554508 WDR5P61964 334 aaKnown RBP9.92□□□□□ -0.82
ACTN1-213ENST00000554508 SETQ01105 290 aaPredicted RBP9.92□□□□□ -0.82
ACTN1-213ENST00000554508 MBTPS1Q14703 1052 aa9.92□□□□□ -0.82
ACTN1-213ENST00000554508 ANKRD1Q15327 319 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms