RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 NGRNQ9NPE2 291 aaKnown RBP7.28□□□□□ -1.24
SCFD1-211ENST00000554437 CD320Q9NPF0 282 aa7.28□□□□□ -1.24
SCFD1-211ENST00000554437 ATP23Q9Y6H3 246 aa7.28□□□□□ -1.24
SCFD1-211ENST00000554437 NPIPB6E9PJ23 425 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 KPNA6O60684 536 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 C8BP07358 591 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 CYP2C8P10632 490 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 MYCLP1P12525 358 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-211ENST00000554437 PI3P19957 117 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 EPHA5P54756 1037 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 KCNA10Q16322 511 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 FIGNQ5HY92 759 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 BTBD8Q5XKL5 378 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 TEPPQ6URK8 271 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 TMEFF1Q8IYR6 380 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 TTLL11Q8NHH1 800 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 DDX1Q92499 740 aaKnown RBP7.27□□□□□ -1.25
SCFD1-211ENST00000554437 CABP5Q9NP86 173 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 RIC8BQ9NVN3 520 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 KCTD3Q9Y597 815 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 CADPSQ9ULU8 1353 aa7.27□□□□□ -1.25
SCFD1-211ENST00000554437 SLC12A8A0AV02 714 aa7.26□□□□□ -1.25
SCFD1-211ENST00000554437 RFXAPO00287 272 aa7.26□□□□□ -1.25
SCFD1-211ENST00000554437 LRG1P02750 347 aa7.26□□□□□ -1.25
SCFD1-211ENST00000554437 LINC00310P59036 64 aa7.26□□□□□ -1.25
SCFD1-211ENST00000554437 CR1LQ2VPA4 569 aa7.26□□□□□ -1.25
SCFD1-211ENST00000554437 PAN2Q504Q3 1202 aaKnown RBP7.26□□□□□ -1.25
SCFD1-211ENST00000554437 CNKSR3Q6P9H4 555 aa7.26□□□□□ -1.25
SCFD1-211ENST00000554437 HHIPL2Q6UWX4 724 aa7.26□□□□□ -1.25
SCFD1-211ENST00000554437 TARS2Q9BW92 718 aaKnown RBP7.26□□□□□ -1.25
SCFD1-211ENST00000554437 FAM90A27PA6NNH2 459 aa7.25□□□□□ -1.25
SCFD1-211ENST00000554437 SCDO00767 359 aa7.25□□□□□ -1.25
SCFD1-211ENST00000554437 FAHP16930 419 aa7.25□□□□□ -1.25
SCFD1-211ENST00000554437 PTPN1P18031 435 aaKnown RBP7.25□□□□□ -1.25
SCFD1-211ENST00000554437 ARHGAP44Q17R89 818 aa7.25□□□□□ -1.25
SCFD1-211ENST00000554437 ZNF385BQ569K4 471 aa7.25□□□□□ -1.25
SCFD1-211ENST00000554437 FAM129CQ86XR2 697 aa7.25□□□□□ -1.25
SCFD1-211ENST00000554437 AHI1Q8N157 1196 aa7.25□□□□□ -1.25
SCFD1-211ENST00000554437 PPM1KQ8N3J5 372 aa7.25□□□□□ -1.25
SCFD1-211ENST00000554437 CHST14Q8NCH0 376 aa7.25□□□□□ -1.25
SCFD1-211ENST00000554437 SYT3Q9BQG1 590 aa7.25□□□□□ -1.25
SCFD1-211ENST00000554437 PDGFDQ9GZP0 370 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-211ENST00000554437 A0A087X0B3 334 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 ACOT7O00154 380 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 CBX4O00257 560 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 TRAF5O00463 557 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 PDE8AO60658 829 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 CLASP2O75122 1294 aaKnown RBP7.24□□□□□ -1.25
SCFD1-211ENST00000554437 KRT37O76014 449 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 POU3F2P20265 443 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-211ENST00000554437 GJA4P35212 333 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 MECP2P51608 486 aaKnown RBP7.24□□□□□ -1.25
SCFD1-211ENST00000554437 PCBP1Q15365 356 aaKnown RBP eCLIP7.24□□□□□ -1.25
SCFD1-211ENST00000554437 CPZQ66K79 652 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 STK32CQ86UX6 486 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 PWWP2AQ96N64 755 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 NOX5Q96PH1 765 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 BOCQ9BWV1 1114 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 MTFR1LQ9H019 292 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 PCDH18Q9HCL0 1135 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 EPB41L4AQ9HCS5 686 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-211ENST00000554437 PMF1-BGLAPU3KQ54 211 aa7.24□□□□□ -1.25
SCFD1-211ENST00000554437 PTPDC1A2A3K4 754 aa7.23□□□□□ -1.25
SCFD1-211ENST00000554437 FAM83GA6ND36 823 aa7.23□□□□□ -1.25
SCFD1-211ENST00000554437 HIP1RO75146 1068 aa7.23□□□□□ -1.25
SCFD1-211ENST00000554437 IRF9Q00978 393 aa7.23□□□□□ -1.25
SCFD1-211ENST00000554437 PKN3Q6P5Z2 889 aa7.23□□□□□ -1.25
SCFD1-211ENST00000554437 NOSTRINQ8IVI9 506 aa7.23□□□□□ -1.25
SCFD1-211ENST00000554437 GORASP1Q9BQQ3 440 aa7.23□□□□□ -1.25
SCFD1-211ENST00000554437 B4GALT6Q9UBX8 382 aa7.23□□□□□ -1.25
SCFD1-211ENST00000554437 PRAMEF25A6NGN4 478 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 GSG1L2A8MUP6 293 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 NUAK1O60285 661 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 PLA2G1BP04054 148 aaKnown RBP7.22□□□□□ -1.25
SCFD1-211ENST00000554437 MASP1P48740 699 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 FSTL4Q6MZW2 842 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 TMC5Q6UXY8 1006 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 OTOP1Q7RTM1 612 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 ZBTB8AQ96BR9 441 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 C11orf84Q9BUA3 381 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-211ENST00000554437 IRF2BPLQ9H1B7 796 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 HSPBP1Q9NZL4 362 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 RBPJLQ9UBG7 517 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 MAPRE3Q9UPY8 281 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 ZKSCAN5Q9Y2L8 839 aa7.22□□□□□ -1.25
SCFD1-211ENST00000554437 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-211ENST00000554437 ZBTB48P10074 688 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-211ENST00000554437 ITGA1P56199 1179 aa7.21□□□□□ -1.26
SCFD1-211ENST00000554437 SMAD4Q13485 552 aaKnown RBP7.21□□□□□ -1.26
SCFD1-211ENST00000554437 SEC23AQ15436 765 aa7.21□□□□□ -1.26
SCFD1-211ENST00000554437 VASNQ6EMK4 673 aa7.21□□□□□ -1.26
SCFD1-211ENST00000554437 CIAPIN1Q6FI81 312 aa7.21□□□□□ -1.26
SCFD1-211ENST00000554437 KIF18BQ86Y91 864 aa7.21□□□□□ -1.26
SCFD1-211ENST00000554437 NXPE1Q8N323 547 aa7.21□□□□□ -1.26
SCFD1-211ENST00000554437 FNIP1Q8TF40 1166 aa7.21□□□□□ -1.26
SCFD1-211ENST00000554437 LEO1Q8WVC0 666 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-211ENST00000554437 TOX2Q96NM4 488 aa7.21□□□□□ -1.26
SCFD1-211ENST00000554437 ORAI3Q9BRQ5 295 aa7.21□□□□□ -1.26
SCFD1-211ENST00000554437 KCNH7Q9NS40 1196 aa7.21□□□□□ -1.26
SCFD1-211ENST00000554437 IFT57Q9NWB7 429 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms