RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 SAGE1Q9NXZ1 904 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 STK17AQ9UEE5 414 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 VAV3Q9UKW4 847 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 DNM3Q9UQ16 869 aa11.73□□□□□ -0.53
TMEM55B-205ENST00000554028 RBBP6Q7Z6E9 1792 aaKnown RBP11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 DHX15O43143 795 aaKnown RBP11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 ATP9AO75110 1047 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 RGS20O76081 388 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 TXNP10599 105 aaKnown RBP11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 PLCG1P19174 1290 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 CYP2B6P20813 491 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 SPIRE1Q08AE8 756 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 ITGB3BPQ13352 177 aaPredicted RBP11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 SV2BQ7L1I2 683 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 TPH2Q8IWU9 490 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 DHX37Q8IY37 1157 aaKnown RBP11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 TRMT44Q8IYL2 757 aaKnown RBP11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 CCDC47Q96A33 483 aaKnown RBP11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 ERO1AQ96HE7 468 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 FGD4Q96M96 766 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 PLIN2Q99541 437 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 SLC9A2Q9UBY0 812 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 KIAA1024Q9UPX6 916 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 SMCHD1A6NHR9 2005 aa11.72□□□□□ -0.53
TMEM55B-205ENST00000554028 GPR25O00155 361 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 GNRH1P01148 92 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 MYL1P05976 194 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 P4HBP07237 508 aaKnown RBP11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 PSAPP07602 524 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 XRCC5P13010 732 aaKnown RBP11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 KCNA2P16389 499 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 SEMA3FQ13275 785 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 IRF5Q13568 498 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 ACVR2BQ13705 512 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 POSTNQ15063 836 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 HYIQ5T013 277 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 MFSD14CQ5VZR4 134 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 OLFML2BQ68BL8 750 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 IQSEC1Q6DN90 963 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 MIS18BP1Q6P0N0 1132 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 CYFIP1Q7L576 1253 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 CATSPER3Q86XQ3 398 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 FBXO16Q8IX29 292 aaPredicted RBP11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 NPLOC4Q8TAT6 608 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 USP6NLQ92738 828 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 NACC1Q96RE7 527 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 MMTAG2Q9BU76 263 aaKnown RBP11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 ZSWIM4Q9H7M6 989 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 GJD2Q9UKL4 321 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 PCDHA10Q9Y5I2 948 aa11.71□□□□□ -0.53
TMEM55B-205ENST00000554028 MYH7BA7E2Y1 1941 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 SYCE3A1L190 88 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 EML1O00423 815 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 NOP56O00567 594 aaKnown RBP11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 NKRFO15226 690 aaKnown RBP eCLIP11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 ACTN4O43707 911 aaKnown RBP11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 FKTNO75072 461 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 GGPS1O95749 300 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 CCDC192P0DO97 292 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 UBA1P22314 1058 aaKnown RBP11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 AFMP43652 599 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 QARSP47897 775 aaKnown RBP11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 CYP4A11Q02928 519 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 GRB10Q13322 594 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 LAMC2Q13753 1193 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 E2F4Q16254 413 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 LY6KQ17RY6 165 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 TMEM119Q4V9L6 283 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 B3GNT9Q6UX72 402 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 CKAP2LQ8IYA6 745 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 LARP4BQ92615 738 aaKnown RBP11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 ATP6V0A1Q93050 837 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 PAGE5Q96GU1 130 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 DYDC2Q96IM9 177 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 TRIM47Q96LD4 638 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 CCDC43Q96MW1 224 aaKnown RBP11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 PNMA5Q96PV4 448 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 HSD17B14Q9BPX1 270 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 KIAA1468Q9P260 1216 aa11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 ZHX1Q9UKY1 873 aaPredicted RBP11.7□□□□□ -0.54
TMEM55B-205ENST00000554028 A0A087X0B3 334 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 RBM47A0AV96 593 aaKnown RBP11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 POTEB3A0JP26 581 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 BACH1O14867 736 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 GTPBP6O43824 516 aaPredicted RBP11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 MED24O75448 989 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 SLITRK3O94933 977 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 SNAI1O95863 264 aaPredicted RBP11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 GH1P01241 217 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 SSBP05455 408 aaKnown RBP eCLIP11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 XRCC6P12956 609 aaKnown RBP eCLIP11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 FLT3LGP49771 235 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 ZNF445P59923 1031 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 ACTR2P61160 394 aa11.69□□□□□ -0.54
TMEM55B-205ENST00000554028 PSMC5P62195 406 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms