RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 GOLPH3Q9H4A6 298 aa7.65□□□□□ -1.19
LINC-ROR-201ENST00000553704 DNAJC18Q9H819 358 aa7.65□□□□□ -1.19
LINC-ROR-201ENST00000553704 FAM153AQ9UHL3 310 aa7.65□□□□□ -1.19
LINC-ROR-201ENST00000553704 ATF5Q9Y2D1 282 aaPredicted RBP7.65□□□□□ -1.19
LINC-ROR-201ENST00000553704 C10orf71Q711Q0 1435 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 RBBP6Q7Z6E9 1792 aaKnown RBP7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 GOLGA6CA6NDK9 693 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 SERPINB2P05120 415 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 GOLGA6DP0CG33 693 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 SNAP25P60880 206 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 PSMD2Q13200 908 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 TRADDQ15628 312 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 HYIQ5T013 277 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 TTC19Q6DKK2 380 aaPredicted RBP7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 TBC1D5Q92609 795 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 SH3GL2Q99962 352 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 GOLGA6AQ9NYA3 693 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 AJAP1Q9UKB5 411 aaPredicted RBP7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 ATP6V0A2Q9Y487 856 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 PCDHAC2Q9Y5I4 1007 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 COL11A2P13942 1736 aaPredicted RBP7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 VGLL3A8MV65 326 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 MPHOSPH10O00566 681 aaKnown RBP7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 ZBTB5O15062 677 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 SERPING1P05155 500 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 HOXD13P35453 343 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 CARSP49589 748 aaKnown RBP7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 CACNB3P54284 484 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 NAP1L1P55209 391 aaKnown RBP7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 RNASE9P60153 205 aaKnown RBP7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 PSMC6P62333 389 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 QRICH1Q2TAL8 776 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 SLC9C1Q4G0N8 1177 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 DNAJC21Q5F1R6 531 aaKnown RBP7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 DPY19L2P1Q6NXN4 242 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 SH2D3CQ8N5H7 860 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 GOLGA6L1Q8N7Z2 621 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 FAM76AQ8TAV0 307 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 TBC1D22AQ8WUA7 517 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 INPP4AQ96PE3 977 aaPredicted RBP7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 RASSF4Q9H2L5 321 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 PSTPIP2Q9H939 334 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 KCNMB3Q9NPA1 279 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 SERPINB13Q9UIV8 391 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 PCDHA12Q9UN75 941 aa7.64□□□□□ -1.19
LINC-ROR-201ENST00000553704 SMCHD1A6NHR9 2005 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 GRID2IPA4D2P6 1211 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 MEIS1O00470 390 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 RAD21O60216 631 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 MARCH6O60337 910 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 HEXIM1O94992 359 aaKnown RBP7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 EPHB4P54760 987 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 SLC12A3P55017 1021 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 SPIRE1Q08AE8 756 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 NAB2Q15742 525 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 HERC4Q5GLZ8 1057 aaPredicted RBP7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 CCDC70Q6NSX1 233 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 FOXR2Q6PJQ5 311 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 ZC3H3Q8IXZ2 948 aaKnown RBP7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 RBM17Q96I25 401 aaKnown RBP7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 CEP63Q96MT8 703 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 ZIM3Q96PE6 472 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 ANO3Q9BYT9 981 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 EDEM3Q9BZQ6 932 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 IKZF4Q9H2S9 585 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 ZHX3Q9H4I2 956 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 ADAMTS1Q9UHI8 967 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 NFU1Q9UMS0 254 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 ZNF646O15015 1829 aaPredicted RBP7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 KDM3AQ9Y4C1 1321 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 FRMD3A2A2Y4 597 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 PPFIA4O75335 1185 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 SLC9A1P19634 815 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 TNFRSF8P28908 595 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 MARSP56192 900 aaKnown RBP7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 SLC20A2Q08357 652 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 SLC18A3Q16572 532 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 MEI1Q5TIA1 1274 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 CDC42EP5Q6NZY7 148 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 SLF2Q8IX21 1173 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 CASKIN2Q8WXE0 1202 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 CAVIN3Q969G5 261 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 USP40Q9NVE5 1235 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 PCDHGC5Q9Y5F6 944 aa7.63□□□□□ -1.19
LINC-ROR-201ENST00000553704 FAM170AA1A519 330 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 RSPH10B2B2RC85 870 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 KRT14P02533 472 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 RSPH10BP0C881 870 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 MYBP10242 640 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 GCFC2P16383 781 aaKnown RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 NR2F2P24468 414 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 POLD1P28340 1107 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 PAFAH1B1P43034 410 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 IRAK1P51617 712 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 GUCY2FP51841 1108 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 MRPL12P52815 198 aaKnown RBP7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 GUCY2DQ02846 1103 aa7.62□□□□□ -1.19
LINC-ROR-201ENST00000553704 KCNH2Q12809 1159 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms