RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ZC3H12BQ5HYM0 836 aaKnown RBP6.21□□□□□ -1.42
SCFD1-210ENST00000553693 KCTD1Q719H9 257 aa6.21□□□□□ -1.42
SCFD1-210ENST00000553693 ASXL2Q76L83 1435 aa6.2□□□□□ -1.42
SCFD1-210ENST00000553693 DIAPH1O60610 1272 aaKnown RBP6.2□□□□□ -1.42
SCFD1-210ENST00000553693 CHGBP05060 677 aa6.2□□□□□ -1.42
SCFD1-210ENST00000553693 APPP05067 770 aa6.2□□□□□ -1.42
SCFD1-210ENST00000553693 EPHA5P54756 1037 aa6.2□□□□□ -1.42
SCFD1-210ENST00000553693 MLLT6P55198 1093 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-210ENST00000553693 SERINC3Q13530 473 aa6.2□□□□□ -1.42
SCFD1-210ENST00000553693 SOGA3Q5TF21 947 aa6.2□□□□□ -1.42
SCFD1-210ENST00000553693 TRMT10BQ6PF06 316 aaKnown RBP6.2□□□□□ -1.42
SCFD1-210ENST00000553693 DTX3Q8N9I9 347 aa6.2□□□□□ -1.42
SCFD1-210ENST00000553693 CLEC4DQ8WXI8 215 aa6.2□□□□□ -1.42
SCFD1-210ENST00000553693 ZCCHC14Q8WYQ9 949 aaKnown RBP6.2□□□□□ -1.42
SCFD1-210ENST00000553693 DEPDC7Q96QD5 511 aa6.2□□□□□ -1.42
SCFD1-210ENST00000553693 INVSQ9Y283 1065 aa6.2□□□□□ -1.42
SCFD1-210ENST00000553693 TRAF6Q9Y4K3 522 aa6.2□□□□□ -1.42
SCFD1-210ENST00000553693 WNT9AO14904 365 aa6.19□□□□□ -1.42
SCFD1-210ENST00000553693 NKRFO15226 690 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCFD1-210ENST00000553693 FBXO21O94952 628 aa6.19□□□□□ -1.42
SCFD1-210ENST00000553693 GABREP78334 506 aa6.19□□□□□ -1.42
SCFD1-210ENST00000553693 SF3A1Q15459 793 aaKnown RBP6.19□□□□□ -1.42
SCFD1-210ENST00000553693 FAM209AQ5JX71 171 aa6.19□□□□□ -1.42
SCFD1-210ENST00000553693 PROSER1Q86XN7 944 aa6.19□□□□□ -1.42
SCFD1-210ENST00000553693 NLGN4XQ8N0W4 816 aa6.19□□□□□ -1.42
SCFD1-210ENST00000553693 KLHL36Q8N4N3 616 aa6.19□□□□□ -1.42
SCFD1-210ENST00000553693 BARX1Q9HBU1 254 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-210ENST00000553693 ZNF536O15090 1300 aa6.19□□□□□ -1.42
SCFD1-210ENST00000553693 GSTA4O15217 222 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 LTFP02788 710 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 GUCY1A3Q02108 690 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 RASA3Q14644 834 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 TBC1D10BQ4KMP7 808 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-210ENST00000553693 CD276Q5ZPR3 534 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 PKN3Q6P5Z2 889 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 HHIPL2Q6UWX4 724 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 RBM12BQ8IXT5 1001 aaKnown RBP6.18□□□□□ -1.42
SCFD1-210ENST00000553693 TTC9BQ8N6N2 239 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 FBXW5Q969U6 566 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 DHRS4Q9BTZ2 278 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 RBPJLQ9UBG7 517 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 WASF3Q9UPY6 502 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 MYRFQ9Y2G1 1151 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 KDM2BQ8NHM5 1336 aa6.18□□□□□ -1.42
SCFD1-210ENST00000553693 LAMTOR5O43504 91 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 B4GALT3O60512 393 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 ENO2P09104 434 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-210ENST00000553693 C6orf222P0C671 652 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-210ENST00000553693 FAM153BP0C7A2 387 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 RBL2Q08999 1139 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 GPR19Q15760 415 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 SMAD2Q15796 467 aaKnown RBP6.17□□□□□ -1.42
SCFD1-210ENST00000553693 SKIDA1Q1XH10 827 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 FAM47CQ5HY64 1035 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 FIGNQ5HY92 759 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 FOXB2Q5VYV0 432 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 GLB1LQ6UWU2 654 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 EP400NLQ6ZTU2 488 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 MBD6Q96DN6 1003 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 EXOC2Q96KP1 924 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 SAMD11Q96NU1 681 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 RBM15Q96T37 977 aaKnown RBP eCLIP6.17□□□□□ -1.42
SCFD1-210ENST00000553693 CD244Q9BZW8 370 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 CATSPERZQ9NTU4 200 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 SMPD4Q9NXE4 827 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 SNTG2Q9NY99 539 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 SRPK3Q9UPE1 567 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 MRPS23Q9Y3D9 190 aaKnown RBP6.17□□□□□ -1.42
SCFD1-210ENST00000553693 TELO2Q9Y4R8 837 aa6.17□□□□□ -1.42
SCFD1-210ENST00000553693 ZNF839A8K0R7 811 aa6.16□□□□□ -1.42
SCFD1-210ENST00000553693 ARVCFO00192 962 aa6.16□□□□□ -1.42
SCFD1-210ENST00000553693 CKMP06732 381 aa6.16□□□□□ -1.42
SCFD1-210ENST00000553693 GJA4P35212 333 aa6.16□□□□□ -1.42
SCFD1-210ENST00000553693 MAGEA10P43363 369 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-210ENST00000553693 ST5P78524 1137 aa6.16□□□□□ -1.42
SCFD1-210ENST00000553693 NFATC3Q12968 1075 aa6.16□□□□□ -1.42
SCFD1-210ENST00000553693 ARHGAP20Q9P2F6 1191 aa6.16□□□□□ -1.42
SCFD1-210ENST00000553693 ZFP69BQ9UJL9 534 aa6.16□□□□□ -1.42
SCFD1-210ENST00000553693 EFCAB14O75071 495 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 KNG1P01042 644 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 COL6A1P12109 1028 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 PFKPQ01813 784 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 ARHGAP36Q6ZRI8 547 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 ZC3H7AQ8IWR0 971 aaKnown RBP6.15□□□□□ -1.42
SCFD1-210ENST00000553693 KBTBD2Q8IY47 623 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 PCDH19Q8TAB3 1148 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 IGDCC4Q8TDY8 1250 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 MKL1Q969V6 931 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 LOXL4Q96JB6 756 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 SRPK1Q96SB4 655 aaKnown RBP6.15□□□□□ -1.42
SCFD1-210ENST00000553693 KCND1Q9NSA2 647 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 PCDHA8Q9Y5H6 950 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 ATP23Q9Y6H3 246 aa6.15□□□□□ -1.42
SCFD1-210ENST00000553693 FAM221BA6H8Z2 402 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 KLHL18O94889 574 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 PTPN1P18031 435 aaKnown RBP6.14□□□□□ -1.43
SCFD1-210ENST00000553693 GLRBP48167 497 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 CRY1Q16526 586 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 BTBD8Q5XKL5 378 aa6.14□□□□□ -1.43
SCFD1-210ENST00000553693 ARHGEF18Q6ZSZ5 1173 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms