RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 IFIT1BQ5T764 474 aaKnown RBP18.26■□□□□ 0.51
ACTN1-209ENST00000553659 KCNV1Q6PIU1 500 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 STAG2Q8N3U4 1231 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 SAMD3Q8N6K7 520 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 ZBED2Q9BTP6 218 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 SIP14410 1827 aa18.26■□□□□ 0.51
ACTN1-209ENST00000553659 KLRF2D3W0D1 207 aa18.25■□□□□ 0.51
ACTN1-209ENST00000553659 LPXNO60711 386 aa18.25■□□□□ 0.51
ACTN1-209ENST00000553659 PPFIA4O75335 1185 aa18.25■□□□□ 0.51
ACTN1-209ENST00000553659 HOXD8P13378 290 aaPredicted RBP18.25■□□□□ 0.51
ACTN1-209ENST00000553659 METAP2P50579 478 aaKnown RBP eCLIP18.25■□□□□ 0.51
ACTN1-209ENST00000553659 CCT2P78371 535 aaKnown RBP18.25■□□□□ 0.51
ACTN1-209ENST00000553659 DEFB103AP81534 67 aa18.25■□□□□ 0.51
ACTN1-209ENST00000553659 CAVIN1Q6NZI2 390 aaKnown RBP18.25■□□□□ 0.51
ACTN1-209ENST00000553659 TMCO2Q7Z6W1 182 aaPredicted RBP18.25■□□□□ 0.51
ACTN1-209ENST00000553659 GPT2Q8TD30 523 aa18.25■□□□□ 0.51
ACTN1-209ENST00000553659 MTMR8Q96EF0 704 aa18.25■□□□□ 0.51
ACTN1-209ENST00000553659 PDCD2LQ9BRP1 358 aa18.25■□□□□ 0.51
ACTN1-209ENST00000553659 LMCD1Q9NZU5 365 aa18.25■□□□□ 0.51
ACTN1-209ENST00000553659 CFAP45Q9UL16 551 aa18.25■□□□□ 0.51
ACTN1-209ENST00000553659 MICAL3Q7RTP6 2002 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 LCHNA4D1U4 455 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 CCDC69A6NI79 296 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 ZBTB43O43298 467 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 EFCAB14O75071 495 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 RGS20O76081 388 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 ZNF286BP0CG31 522 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 MYCLP12524 364 aaPredicted RBP18.24■□□□□ 0.51
ACTN1-209ENST00000553659 IKBKEQ14164 716 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 SEC23AQ15436 765 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 TRIM71Q2Q1W2 868 aaKnown RBP18.24■□□□□ 0.51
ACTN1-209ENST00000553659 MYSM1Q5VVJ2 828 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 NFXL1Q6ZNB6 911 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 CYB5R4Q7L1T6 521 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 SPRED2Q7Z698 418 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 IGDCC4Q8TDY8 1250 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 HLA-CQ95604 372 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 PCDHA1Q9Y5I3 950 aa18.24■□□□□ 0.51
ACTN1-209ENST00000553659 CCDC196A0A1B0GTZ2 297 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 PALM3A6NDB9 673 aaPredicted RBP18.23■□□□□ 0.51
ACTN1-209ENST00000553659 IFIT3O14879 490 aaKnown RBP18.23■□□□□ 0.51
ACTN1-209ENST00000553659 ZBTB5O15062 677 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 PPP1R11O60927 126 aaPredicted RBP18.23■□□□□ 0.51
ACTN1-209ENST00000553659 GJB5O95377 273 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 CTDNEP1O95476 244 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 TCTN1Q2MV58 587 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 CELF3Q5SZQ8 465 aaKnown RBP18.23■□□□□ 0.51
ACTN1-209ENST00000553659 ZNF618Q5T7W0 954 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 TRAF7Q6Q0C0 670 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 VSIG10LQ86VR7 867 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 RAD9AQ99638 391 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 C1QTNF1Q9BXJ1 281 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 MAD2L2Q9UI95 211 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 BRPF3Q9ULD4 1205 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 SLC12A7Q9Y666 1083 aa18.23■□□□□ 0.51
ACTN1-209ENST00000553659 KAT6AQ92794 2004 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 TGFB3P10600 412 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 ZNF200P98182 395 aaPredicted RBP18.22■□□□□ 0.51
ACTN1-209ENST00000553659 DNM1Q05193 864 aaKnown RBP18.22■□□□□ 0.51
ACTN1-209ENST00000553659 RESTQ13127 1097 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 WTAPQ15007 396 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 PGM5Q15124 567 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 ZSCAN23Q3MJ62 389 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 HSDL1Q3SXM5 330 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 APOA5Q6Q788 366 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 WASF1Q92558 559 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 WNT8BQ93098 351 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 SPATA33Q96N06 139 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 ZNF396Q96N95 335 aaPredicted RBP18.22■□□□□ 0.51
ACTN1-209ENST00000553659 LY9Q9HBG7 655 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 RAPGEFL1Q9UHV5 662 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 STK36Q9NRP7 1315 aa18.22■□□□□ 0.51
ACTN1-209ENST00000553659 DOCK5Q9H7D0 1870 aa18.21■□□□□ 0.51
ACTN1-209ENST00000553659 FIBPO43427 364 aa18.21■□□□□ 0.51
ACTN1-209ENST00000553659 GGPS1O95749 300 aa18.21■□□□□ 0.51
ACTN1-209ENST00000553659 HOXA13P31271 388 aaPredicted RBP18.21■□□□□ 0.51
ACTN1-209ENST00000553659 ERVK-21P61565 698 aa18.21■□□□□ 0.51
ACTN1-209ENST00000553659 SP2Q02086 613 aa18.21■□□□□ 0.51
ACTN1-209ENST00000553659 TRAF1Q13077 416 aa18.21■□□□□ 0.51
ACTN1-209ENST00000553659 HIC1Q14526 733 aa18.21■□□□□ 0.51
ACTN1-209ENST00000553659 MBTPS1Q14703 1052 aa18.21■□□□□ 0.51
ACTN1-209ENST00000553659 TGS1Q96RS0 853 aaKnown RBP18.21■□□□□ 0.51
ACTN1-209ENST00000553659 C16orf70Q9BSU1 422 aa18.21■□□□□ 0.51
ACTN1-209ENST00000553659 SUGCTQ9HAC7 445 aa18.21■□□□□ 0.51
ACTN1-209ENST00000553659 NCOA5Q9HCD5 579 aaKnown RBP18.21■□□□□ 0.51
ACTN1-209ENST00000553659 LINC01553A4QN01 128 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 GOLGA8AA7E2F4 631 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 GCOM1H8Y6P7 765 aaPredicted RBP18.2■□□□□ 0.5
ACTN1-209ENST00000553659 SORBS3O60504 671 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 LGR5O75473 907 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 POLR2MP0CAP2 368 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 SERINC5Q86VE9 423 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 IL31RAQ8NI17 732 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 GDPD5Q8WTR4 605 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 RIOX1Q9H6W3 641 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 MLXIPQ9HAP2 919 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 GRPEL1Q9HAV7 217 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 ORC3Q9UBD5 711 aaPredicted RBP18.2■□□□□ 0.5
ACTN1-209ENST00000553659 EMSYQ7Z589 1322 aa18.2■□□□□ 0.5
ACTN1-209ENST00000553659 UBA1P22314 1058 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms