RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 HERC5Q9UII4 1024 aaKnown RBP6.79□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PALD1Q9ULE6 856 aa6.79□□□□□ -1.32
SMARCE1P3-201ENST00000553649 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1P3-201ENST00000553649 MYO9BQ13459 2157 aa6.79□□□□□ -1.32
SMARCE1P3-201ENST00000553649 ANKRD11Q6UB99 2663 aaPredicted RBP6.79□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PLXNA3P51805 1871 aa6.79□□□□□ -1.32
SMARCE1P3-201ENST00000553649 TPRP12270 2363 aaKnown RBP6.79□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PDS5AQ29RF7 1337 aaKnown RBP6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 UNC79Q9P2D8 2635 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 TMEM221A6NGB7 291 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 USP17L10C9JJH3 530 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 M0R296 226 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 BAG3O95817 575 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 NBL1P41271 181 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 MCAMP43121 646 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 TAP1Q03518 808 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 ALDH1L2Q3SY69 923 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 NAA16Q6N069 864 aaPredicted RBP6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 EDAQ92838 391 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PBXIP1Q96AQ6 731 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 VWCEQ96DN2 955 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 KRTAP4-9Q9BYQ8 210 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 PPP1R12CQ9BZL4 782 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 API5Q9BZZ5 524 aaKnown RBP6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 IRF2BPLQ9H1B7 796 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 C1orf115Q9H7X2 142 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 ZFATQ9P243 1243 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 DMGDHQ9UI17 866 aaKnown RBP6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 ZBTB21Q9ULJ3 1066 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 HDAC5Q9UQL6 1122 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 USP24Q9UPU5 2620 aa6.78□□□□□ -1.32
SMARCE1P3-201ENST00000553649 ZNF536O15090 1300 aa6.77□□□□□ -1.32
SMARCE1P3-201ENST00000553649 FLT1P17948 1338 aa6.77□□□□□ -1.32
SMARCE1P3-201ENST00000553649 RIF1Q5UIP0 2472 aaKnown RBP6.77□□□□□ -1.32
SMARCE1P3-201ENST00000553649 C19orf81C9J6K1 198 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 H0Y858 1186 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 GLRX3O76003 335 aaKnown RBP6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 PGK1P00558 417 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 GH2P01242 217 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 HLA-DOAP06340 250 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ATP2A2P16615 1042 aaKnown RBP6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CYP2C18P33260 490 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CDK7P50613 346 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 IRAK1P51617 712 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 SLFN5Q08AF3 891 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 G3BP1Q13283 466 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 OS9Q13438 667 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CCINQ13939 588 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 RAB3GAP1Q15042 981 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TMEM67Q5HYA8 995 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TTC39AQ5SRH9 613 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 PRAMEF19Q5SWL8 479 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP17L2Q6R6M4 530 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ADGRA1Q86SQ6 560 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 SUGP1Q8IWZ8 645 aaKnown RBP6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ADSSL1Q8N142 457 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 FBXL6Q8N531 539 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 NEK9Q8TD19 979 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 C12orf42Q96LP6 360 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 DHX36Q9H2U1 1008 aaKnown RBP6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 DNAJC18Q9H819 358 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 XPNPEP3Q9NQH7 507 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TLR9Q9NR96 1032 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 FRRS1LQ9P0K9 344 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 PRKAG3Q9UGI9 489 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 NRBP1Q9UHY1 535 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 RABGAP1Q9Y3P9 1069 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 SLC4A7Q9Y6M7 1214 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 BRWD1Q9NSI6 2320 aa6.77□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TECTAO75443 2155 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 KIAA1324LA8MWY0 1029 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 DKK1O94907 266 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MAP4K4O95819 1239 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 UQCRFS1P1P0C7P4 283 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ARID4AP29374 1257 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 DYNLL1P63167 89 aaKnown RBP6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 CCNA1P78396 465 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 METTL16Q86W50 562 aaKnown RBP6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 WFDC8Q8IUA0 241 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 FOXP4Q8IVH2 680 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ADHFE1Q8IWW8 467 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 MIGA1Q8NAN2 632 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 TSEN2Q8NCE0 465 aaKnown RBP6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 PNMA5Q96PV4 448 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 UPF3BQ9BZI7 483 aaKnown RBP6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 STARD7Q9NQZ5 370 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 GINM1Q9NU53 330 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 LMCD1Q9NZU5 365 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 IVNS1ABPQ9Y6Y0 642 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 UMODL1Q5DID0 1318 aa6.76□□□□□ -1.33
SMARCE1P3-201ENST00000553649 ZNF292O60281 2723 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP17L15C9J2P7 530 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP17L13C9JLJ4 530 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP17L11C9JVI0 530 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP17L18D6R9N7 530 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP17L22D6RA61 530 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP17L17D6RBQ6 530 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP17L19D6RCP7 530 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 USP17L20D6RJB6 530 aa6.75□□□□□ -1.33
SMARCE1P3-201ENST00000553649 H3BQ06 376 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms