RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 AFAP1L1Q8TED9 768 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 ATP6V0A1Q93050 837 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 KCNH7Q9NS40 1196 aa20.85■□□□□ 0.93
SHMT2-206ENST00000553529 CHD9Q3L8U1 2897 aa20.84■□□□□ 0.93
SHMT2-206ENST00000553529 RFXAPO00287 272 aa20.84■□□□□ 0.93
SHMT2-206ENST00000553529 PRPF3O43395 683 aaKnown RBP20.84■□□□□ 0.93
SHMT2-206ENST00000553529 FOSL2P15408 326 aa20.84■□□□□ 0.93
SHMT2-206ENST00000553529 RBL2Q08999 1139 aa20.84■□□□□ 0.93
SHMT2-206ENST00000553529 XRRA1Q6P2D8 792 aa20.84■□□□□ 0.93
SHMT2-206ENST00000553529 CAGE1Q8TC20 777 aa20.84■□□□□ 0.93
SHMT2-206ENST00000553529 LMBR1Q8WVP7 490 aa20.84■□□□□ 0.93
SHMT2-206ENST00000553529 SENP7Q9BQF6 1050 aa20.84■□□□□ 0.93
SHMT2-206ENST00000553529 PRDM6Q9NQX0 595 aa20.84■□□□□ 0.93
SHMT2-206ENST00000553529 LCHNA4D1U4 455 aa20.83■□□□□ 0.93
SHMT2-206ENST00000553529 EPOPA6NHQ4 379 aa20.83■□□□□ 0.93
SHMT2-206ENST00000553529 PSMA5P28066 241 aa20.83■□□□□ 0.93
SHMT2-206ENST00000553529 SREBF1P36956 1147 aa20.83■□□□□ 0.93
SHMT2-206ENST00000553529 RCAN1P53805 252 aa20.83■□□□□ 0.93
SHMT2-206ENST00000553529 ARHGAP4P98171 946 aa20.83■□□□□ 0.93
SHMT2-206ENST00000553529 FBXL16Q8N461 479 aa20.83■□□□□ 0.93
SHMT2-206ENST00000553529 MAFAQ8NHW3 353 aaPredicted RBP20.83■□□□□ 0.93
SHMT2-206ENST00000553529 TRAPPC12Q8WVT3 735 aa20.83■□□□□ 0.93
SHMT2-206ENST00000553529 AGO4Q9HCK5 861 aaKnown RBP20.83■□□□□ 0.93
SHMT2-206ENST00000553529 CCNE2O96020 404 aa20.82■□□□□ 0.92
SHMT2-206ENST00000553529 CA3P07451 260 aa20.82■□□□□ 0.92
SHMT2-206ENST00000553529 EVCP57679 992 aa20.82■□□□□ 0.92
SHMT2-206ENST00000553529 WDR5P61964 334 aaKnown RBP20.82■□□□□ 0.92
SHMT2-206ENST00000553529 ADAM17P78536 824 aa20.82■□□□□ 0.92
SHMT2-206ENST00000553529 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.82■□□□□ 0.924e-7■□□□□ 9.3
SHMT2-206ENST00000553529 CRYGNQ8WXF5 182 aa20.82■□□□□ 0.92
SHMT2-206ENST00000553529 GJA10Q969M2 543 aa20.82■□□□□ 0.92
SHMT2-206ENST00000553529 CYP46A1Q9Y6A2 500 aa20.82■□□□□ 0.92
SHMT2-206ENST00000553529 CXCL10P02778 98 aa20.81■□□□□ 0.92
SHMT2-206ENST00000553529 RFC2P35250 354 aa20.81■□□□□ 0.92
SHMT2-206ENST00000553529 IGBP1P78318 339 aa20.81■□□□□ 0.92
SHMT2-206ENST00000553529 CEP55Q53EZ4 464 aa20.81■□□□□ 0.92
SHMT2-206ENST00000553529 FAM117BQ6P1L5 589 aa20.81■□□□□ 0.92
SHMT2-206ENST00000553529 PPM1EQ8WY54 764 aa20.81■□□□□ 0.92
SHMT2-206ENST00000553529 ZMYND12Q9H0C1 365 aa20.81■□□□□ 0.92
SHMT2-206ENST00000553529 JPH1Q9HDC5 661 aaPredicted RBP20.81■□□□□ 0.92
SHMT2-206ENST00000553529 GJB4Q9NTQ9 266 aa20.81■□□□□ 0.92
SHMT2-206ENST00000553529 PDRG1Q9NUG6 133 aa20.81■□□□□ 0.92
SHMT2-206ENST00000553529 MSRAQ9UJ68 235 aa20.81■□□□□ 0.92
SHMT2-206ENST00000553529 CHD7Q9P2D1 2997 aa20.8■□□□□ 0.92
SHMT2-206ENST00000553529 IGLV3-22A0A075B6J6 115 aa20.8■□□□□ 0.92
SHMT2-206ENST00000553529 LARGE1O95461 756 aa20.8■□□□□ 0.92
SHMT2-206ENST00000553529 PFKMP08237 780 aa20.8■□□□□ 0.92
SHMT2-206ENST00000553529 IFNAR1P17181 557 aa20.8■□□□□ 0.92
SHMT2-206ENST00000553529 MARCH8Q5T0T0 291 aa20.8■□□□□ 0.92
SHMT2-206ENST00000553529 KRT40Q6A162 431 aa20.8■□□□□ 0.92
SHMT2-206ENST00000553529 CCDC155Q8N6L0 562 aa20.8■□□□□ 0.92
SHMT2-206ENST00000553529 SEPT1Q8WYJ6 367 aa20.8■□□□□ 0.92
SHMT2-206ENST00000553529 MTIF3Q9H2K0 278 aaKnown RBP20.8■□□□□ 0.92
SHMT2-206ENST00000553529 SLC9A2Q9UBY0 812 aa20.8■□□□□ 0.92
SHMT2-206ENST00000553529 TMEM265A0A087WTH1 108 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 CCDC196A0A1B0GTZ2 297 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 hCG_1984214I3L0E3 225 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 MEIS1O00470 390 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 ACTR2P61160 394 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 SCRN1Q12765 414 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 PPP2R2DQ66LE6 453 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 PLA2G4DQ86XP0 818 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 HERC6Q8IVU3 1022 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 ZNF713Q8N859 430 aaPredicted RBP20.79■□□□□ 0.92
SHMT2-206ENST00000553529 DBF4BQ8NFT6 615 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 GLG1Q92896 1179 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 RNF26Q9BY78 433 aaPredicted RBP20.79■□□□□ 0.92
SHMT2-206ENST00000553529 TPCN1Q9ULQ1 816 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 UNC80Q8N2C7 3258 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 COL4A4P53420 1690 aaPredicted RBP20.79■□□□□ 0.92
SHMT2-206ENST00000553529 PRUNE2Q8WUY3 3088 aa20.79■□□□□ 0.92
SHMT2-206ENST00000553529 ESYT2A0FGR8 921 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 RSPH10B2B2RC85 870 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 DHX15O43143 795 aaKnown RBP20.78■□□□□ 0.92
SHMT2-206ENST00000553529 RSPH10BP0C881 870 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 ACTN1P12814 892 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 ZNF76P36508 570 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 PPFIA1Q13136 1202 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 AP3B2Q13367 1082 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 RAB30Q15771 203 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 GRIK4Q16099 956 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 CNKSR3Q6P9H4 555 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 REXO1Q8N1G1 1221 aaKnown RBP20.78■□□□□ 0.92
SHMT2-206ENST00000553529 EHMT1Q9H9B1 1298 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 ZNF215Q9UL58 517 aaPredicted RBP20.78■□□□□ 0.92
SHMT2-206ENST00000553529 PCDHA11Q9Y5I1 949 aa20.78■□□□□ 0.92
SHMT2-206ENST00000553529 MICAL3Q7RTP6 2002 aa20.77■□□□□ 0.92
SHMT2-206ENST00000553529 LGR5O75473 907 aa20.77■□□□□ 0.92
SHMT2-206ENST00000553529 FOSP01100 380 aaPredicted RBP20.77■□□□□ 0.92
SHMT2-206ENST00000553529 CHRNA1P02708 482 aa20.77■□□□□ 0.92
SHMT2-206ENST00000553529 MKRN4PQ13434 485 aaPredicted RBP20.77■□□□□ 0.92
SHMT2-206ENST00000553529 NPY5RQ15761 445 aa20.77■□□□□ 0.92
SHMT2-206ENST00000553529 CCDC85BQ15834 202 aaPredicted RBP20.77■□□□□ 0.92
SHMT2-206ENST00000553529 CDHR1Q96JP9 859 aa20.77■□□□□ 0.92
SHMT2-206ENST00000553529 TM6SF1Q9BZW5 370 aa20.77■□□□□ 0.92
SHMT2-206ENST00000553529 SLC28A3Q9HAS3 691 aa20.77■□□□□ 0.92
SHMT2-206ENST00000553529 C6orf50Q9HD87 102 aa20.77■□□□□ 0.92
SHMT2-206ENST00000553529 INSRRP14616 1297 aa20.76■□□□□ 0.91
SHMT2-206ENST00000553529 TMEM62Q0P6H9 643 aa20.76■□□□□ 0.91
SHMT2-206ENST00000553529 PLCB4Q15147 1175 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms