RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 VWA5B2Q8N398 1253 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 OSBP2Q969R2 916 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 GMCL1Q96IK5 515 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 MKNK2Q9HBH9 465 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 TRMT13Q9NUP7 481 aaKnown RBP8.66□□□□□ -1.02
ATXN3-219ENST00000553488 NOD1Q9Y239 953 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 Q9Y3F1 56 aa8.66□□□□□ -1.02
ATXN3-219ENST00000553488 TNKSO95271 1327 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 TMEM232C9JQI7 657 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 DYNC1LI2O43237 492 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-219ENST00000553488 LPXNO60711 386 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 THBS1P07996 1170 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 CYP2C9P11712 490 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 STAT2P52630 851 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 PURAQ00577 322 aaKnown RBP8.65□□□□□ -1.02
ATXN3-219ENST00000553488 TAP1Q03518 808 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 DBN1Q16643 649 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 TKFCQ3LXA3 575 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 MUM1L1Q5H9M0 696 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 TMEM67Q5HYA8 995 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 SLFN13Q68D06 897 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 ZSCAN25Q6NSZ9 544 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 NOL8Q76FK4 1167 aaKnown RBP8.65□□□□□ -1.02
ATXN3-219ENST00000553488 SV2AQ7L0J3 742 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 DEPDC4Q8N2C3 294 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 NEDD1Q8NHV4 660 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 SLC9A7Q96T83 725 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 AP5M1Q9H0R1 490 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 CERS4Q9HA82 394 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 VTA1Q9NP79 307 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 ZBTB40Q9NUA8 1239 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 CYP39A1Q9NYL5 469 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 COG5Q9UP83 839 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 HCN4Q9Y3Q4 1203 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 CTDP1Q9Y5B0 961 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-219ENST00000553488 NLRC5Q86WI3 1866 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 CFAP54Q96N23 3096 aa8.65□□□□□ -1.02
ATXN3-219ENST00000553488 MYO7AQ13402 2215 aa8.65□□□□□ -1.03
ATXN3-219ENST00000553488 MYH6P13533 1939 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 MINDY4BA8MYZ0 360 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 M0R2C6 588 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 GPAA1O43292 621 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 ZEB2O60315 1214 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 PLA2G6O60733 806 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 HMMRO75330 724 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 SMTNP53814 917 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 DUSP28Q4G0W2 176 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 C4orf17Q53FE4 359 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 TMEM31Q5JXX7 168 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 RNFT1Q5M7Z0 435 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 IQSEC1Q6DN90 963 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 EEPD1Q7L9B9 569 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 DEFB128Q7Z7B8 93 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 FAM160B2Q86V87 743 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 KBTBD3Q8NAB2 608 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 STAG1Q8WVM7 1258 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 APPBP2Q92624 585 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-219ENST00000553488 TRERF1Q96PN7 1200 aa8.64□□□□□ -1.03
ATXN3-219ENST00000553488 MYH7BA7E2Y1 1941 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 RBM47A0AV96 593 aaKnown RBP8.63□□□□□ -1.03
ATXN3-219ENST00000553488 DKK1O94907 266 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 ALAS1P13196 640 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 RFC2P35250 354 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 ALDH5A1P51649 535 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-219ENST00000553488 GRB10Q13322 594 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 TLR1Q15399 786 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 HERC6Q8IVU3 1022 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 PHOSPHO2Q8TCD6 241 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 RHBDD1Q8TEB9 315 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 ARNTL2Q8WYA1 636 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 BCL11AQ9H165 835 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 CD320Q9NPF0 282 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 TIMMDC1Q9NPL8 285 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 PRR12Q9ULL5 1215 aa8.63□□□□□ -1.03
ATXN3-219ENST00000553488 RALGAPA2Q2PPJ7 1873 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 LCHNA4D1U4 455 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 FAM86C2PA6NEL3 165 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 FOXP2O15409 715 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 SMARCA5O60264 1052 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-219ENST00000553488 IQCF3P0C7M6 154 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 SUPT20HL2P0C7V6 817 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 TSPY3P0CV98 308 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 TSPY8P0CW00 308 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 ACTN1P12814 892 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 GNAT2P19087 354 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 MCCP23508 829 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 SLC1A4P43007 532 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 NOVP48745 357 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 TDO2P48775 406 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 SNAP25P60880 206 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 CLDN10P78369 228 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 GAS6Q14393 721 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 GPNMBQ14956 572 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 NSMFQ6X4W1 530 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 KIAA1211Q6ZU35 1233 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 KCTD1Q719H9 257 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 IFNL3Q8IZI9 196 aa8.62□□□□□ -1.03
ATXN3-219ENST00000553488 ZNF444Q8N0Y2 327 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms