RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 TKFCQ3LXA3 575 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 MIIPQ5JXC2 388 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 RINT1Q6NUQ1 792 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 XRRA1Q6P2D8 792 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 TRIM65Q6PJ69 517 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 LRRC55Q6ZSA7 311 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 EPM2AIP1Q7L775 607 aaPredicted RBP10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 TMTC1Q8IUR5 882 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 CREBRFQ8IUR6 639 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 CNGA4Q8IV77 575 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 SCFD1Q8WVM8 642 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 CNKSR2Q8WXI2 1034 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 CNOT6LQ96LI5 555 aaKnown RBP10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 ERGIC2Q96RQ1 377 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 TSG101Q99816 390 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 SYT17Q9BSW7 474 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 NUP58Q9BVL2 599 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 TEKT3Q9BXF9 490 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 KCTD10Q9H3F6 313 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 UNC45AQ9H3U1 944 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 AGO4Q9HCK5 861 aaKnown RBP10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 HOXC10Q9NYD6 342 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 GGA3Q9NZ52 723 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 CAPN11Q9UMQ6 739 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 FZD1Q9UP38 647 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 RIPK3Q9Y572 518 aa10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 CTDP1Q9Y5B0 961 aaPredicted RBP10.42□□□□□ -0.74
MTHFD1-203ENST00000553391 IPO5O00410 1097 aaKnown RBP10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 NKRFO15226 690 aaKnown RBP eCLIP10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 GAS7O60861 476 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 KIF20AO95235 890 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 KRT18P05783 430 aaKnown RBP10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 MTIF2P46199 727 aaKnown RBP10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 HMGCS2P54868 508 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 FKBP3Q00688 224 aaKnown RBP10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 BAATQ14032 418 aaPredicted RBP10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 VWA3BQ502W6 1294 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 FIGNQ5HY92 759 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 RAD9BQ6WBX8 426 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 RNF207Q6ZRF8 634 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 VSIG10LQ86VR7 867 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 TPH2Q8IWU9 490 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 RETREG2Q8NC44 543 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 OR8K1Q8NGG5 319 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 IL31RAQ8NI17 732 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 WNK4Q96J92 1243 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 C16orf45Q96MC5 204 aaPredicted RBP10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 CEP63Q96MT8 703 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 PDCD2LQ9BRP1 358 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 NOC4LQ9BVI4 516 aaKnown RBP10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 FGFBP2Q9BYJ0 223 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 BHMT2Q9H2M3 363 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 KCNH7Q9NS40 1196 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 TBC1D22BQ9NU19 505 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 PPP2R2CQ9Y2T4 447 aa10.41□□□□□ -0.74
MTHFD1-203ENST00000553391 MYPNQ86TC9 1320 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 TTC26A0AVF1 554 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 B4DLN1 442 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 RIOK3O14730 519 aaKnown RBP10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 ZBTB39O15060 712 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 LYPLA2O95372 231 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 GNA14O95837 355 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 P4HBP07237 508 aaKnown RBP10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 TPM1P09493 284 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 GAP43P17677 238 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 HOXD13P35453 343 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 KRT9P35527 623 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 MARSP56192 900 aaKnown RBP10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 CYP4A11Q02928 519 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 ITGB3BPQ13352 177 aaPredicted RBP10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 TMEM132BQ14DG7 1078 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 PGM5Q15124 567 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 MAN2A1Q16706 1144 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 BMT2Q1RMZ1 405 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 RBM46Q8TBY0 533 aaKnown RBP10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 NEK9Q8TD19 979 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 REEP2Q9BRK0 252 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 RUSC1Q9BVN2 902 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 TTYH3Q9C0H2 523 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 BCAS3Q9H6U6 928 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 PXMP2Q9NR77 195 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 RNF146Q9NTX7 359 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 TMOD4Q9NZQ9 345 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 TBC1D7Q9P0N9 293 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 WRAP73Q9P2S5 460 aaPredicted RBP10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 ZNF214Q9UL59 606 aaPredicted RBP10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 TRAF3IP3Q9Y228 551 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 COL4A3BPQ9Y5P4 624 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 ADGRG1Q9Y653 693 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 SNCAIPQ9Y6H5 919 aa10.4□□□□□ -0.74
MTHFD1-203ENST00000553391 UQCRHLA0A096LP55 91 aa10.39□□□□□ -0.75
MTHFD1-203ENST00000553391 A0A1W2PQJ5 194 aa10.39□□□□□ -0.75
MTHFD1-203ENST00000553391 GOLGA6L9A6NEM1 432 aa10.39□□□□□ -0.75
MTHFD1-203ENST00000553391 TRAF5O00463 557 aa10.39□□□□□ -0.75
MTHFD1-203ENST00000553391 PDXKO00764 312 aa10.39□□□□□ -0.75
MTHFD1-203ENST00000553391 DYNC1I1O14576 645 aa10.39□□□□□ -0.75
MTHFD1-203ENST00000553391 MAFGO15525 162 aa10.39□□□□□ -0.75
MTHFD1-203ENST00000553391 UQCRHP07919 91 aa10.39□□□□□ -0.75
MTHFD1-203ENST00000553391 PRKCSHP14314 528 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms