RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 RASGRP4Q8TDF6 673 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 PPP1R13LQ8WUF5 828 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 GLG1Q92896 1179 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 ZSCAN31Q96LW9 406 aaPredicted RBP17.43■□□□□ 0.38
SHMT2-204ENST00000553324 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.43■□□□□ 0.383e-9■□□□□ 10
SHMT2-204ENST00000553324 ZNF577Q9BSK1 485 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 WNT8AQ9H1J5 351 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 RNPEPQ9H4A4 650 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 TCEAL9Q9UHQ7 104 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 UMODL1Q5DID0 1318 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 NRCAMQ92823 1304 aa17.43■□□□□ 0.38
SHMT2-204ENST00000553324 IGLV3-22A0A075B6J6 115 aa17.42■□□□□ 0.38
SHMT2-204ENST00000553324 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.42■□□□□ 0.38
SHMT2-204ENST00000553324 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.42■□□□□ 0.38
SHMT2-204ENST00000553324 IPO5O00410 1097 aaKnown RBP17.42■□□□□ 0.38
SHMT2-204ENST00000553324 SOX1O00570 391 aaPredicted RBP17.42■□□□□ 0.38
SHMT2-204ENST00000553324 SMAD3P84022 425 aaKnown RBP17.42■□□□□ 0.38
SHMT2-204ENST00000553324 PLPPR4Q7Z2D5 763 aa17.42■□□□□ 0.38
SHMT2-204ENST00000553324 NECAB1Q8N987 351 aa17.42■□□□□ 0.38
SHMT2-204ENST00000553324 HERVK_113Q902F9 699 aa17.42■□□□□ 0.38
SHMT2-204ENST00000553324 ATP6V0A1Q93050 837 aa17.42■□□□□ 0.38
SHMT2-204ENST00000553324 LRCH3Q96II8 777 aa17.42■□□□□ 0.38
SHMT2-204ENST00000553324 PHF20Q9BVI0 1012 aa17.42■□□□□ 0.38
SHMT2-204ENST00000553324 SZT2Q5T011 3432 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 M0R2N6 131 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 ADAMTS3O15072 1205 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 LGR5O75473 907 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 ATG7O95352 703 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 CTDNEP1O95476 244 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 ACRP10323 421 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 ACTN1P12814 892 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 SELPP16109 830 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 HOXC8P31273 242 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 SLC26A2P50443 739 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 ACTR2P61160 394 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 ITGB3BPQ13352 177 aaPredicted RBP17.41■□□□□ 0.38
SHMT2-204ENST00000553324 PRR16Q569H4 304 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 KRT25Q7Z3Z0 450 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 TBCKQ8TEA7 893 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 SCLYQ96I15 445 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 AIFM3Q96NN9 605 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 CTAGE1Q96RT6 745 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 BRMS1Q9HCU9 246 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 LTBP2Q14767 1821 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 EMSYQ7Z589 1322 aa17.41■□□□□ 0.38
SHMT2-204ENST00000553324 CAND2O75155 1236 aa17.4■□□□□ 0.38
SHMT2-204ENST00000553324 CKBP12277 381 aa17.4■□□□□ 0.38
SHMT2-204ENST00000553324 STAT5BP51692 787 aa17.4■□□□□ 0.38
SHMT2-204ENST00000553324 NONOQ15233 471 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHMT2-204ENST00000553324 RABEP1Q15276 862 aa17.4■□□□□ 0.38
SHMT2-204ENST00000553324 FAM109BQ6ICB4 259 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-204ENST00000553324 MOXD1Q6UVY6 613 aa17.4■□□□□ 0.38
SHMT2-204ENST00000553324 SERINC5Q86VE9 423 aa17.4■□□□□ 0.38
SHMT2-204ENST00000553324 TRIM50Q86XT4 487 aa17.4■□□□□ 0.38
SHMT2-204ENST00000553324 LLPHQ9BRT6 129 aaKnown RBP17.4■□□□□ 0.38
SHMT2-204ENST00000553324 SH2B1Q9NRF2 756 aaPredicted RBP17.4■□□□□ 0.38
SHMT2-204ENST00000553324 SETD4Q9NVD3 440 aa17.4■□□□□ 0.38
SHMT2-204ENST00000553324 KCNJ14Q9UNX9 436 aa17.4■□□□□ 0.38
SHMT2-204ENST00000553324 MYH7BA7E2Y1 1941 aa17.4■□□□□ 0.38
SHMT2-204ENST00000553324 CYP3A7-CYP3A51PA0A087WV96 503 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 CCDC194A0A1B0GVG4 234 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 RRN3P2A6NIE6 340 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 DHX15O43143 795 aaKnown RBP17.39■□□□□ 0.37
SHMT2-204ENST00000553324 RPLP2P05387 115 aaKnown RBP17.39■□□□□ 0.37
SHMT2-204ENST00000553324 CYP3A7P24462 503 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 ZNF200P98182 395 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-204ENST00000553324 KRT76Q01546 638 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 TRIM29Q14134 588 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 NPY5RQ15761 445 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 Q4G0T1 1027 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 RASIP1Q5U651 963 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 FAM160B1Q5W0V3 765 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 ZNF746Q6NUN9 644 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-204ENST00000553324 MIS18BP1Q6P0N0 1132 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 LRRC8DQ7L1W4 858 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 SMAP1Q8IYB5 467 aaPredicted RBP17.39■□□□□ 0.37
SHMT2-204ENST00000553324 NSUN7Q8NE18 718 aaKnown RBP17.39■□□□□ 0.37
SHMT2-204ENST00000553324 KIF2CQ99661 725 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 NAP1L4Q99733 375 aaKnown RBP17.39■□□□□ 0.37
SHMT2-204ENST00000553324 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
SHMT2-204ENST00000553324 TELO2Q9Y4R8 837 aa17.39■□□□□ 0.37
SHMT2-204ENST00000553324 LAMA2P24043 3122 aaKnown RBP17.39■□□□□ 0.37
SHMT2-204ENST00000553324 TREHO43280 583 aa17.38■□□□□ 0.37
SHMT2-204ENST00000553324 ST18O60284 1047 aa17.38■□□□□ 0.37
SHMT2-204ENST00000553324 LARGE1O95461 756 aa17.38■□□□□ 0.37
SHMT2-204ENST00000553324 FDPSP14324 419 aaKnown RBP17.38■□□□□ 0.37
SHMT2-204ENST00000553324 ADAM17P78536 824 aa17.38■□□□□ 0.37
SHMT2-204ENST00000553324 PPFIA1Q13136 1202 aa17.38■□□□□ 0.37
SHMT2-204ENST00000553324 TAF2Q6P1X5 1199 aa17.38■□□□□ 0.37
SHMT2-204ENST00000553324 ABHD15Q6UXT9 468 aa17.38■□□□□ 0.37
SHMT2-204ENST00000553324 OTOP2Q7RTS6 562 aa17.38■□□□□ 0.37
SHMT2-204ENST00000553324 DEFB128Q7Z7B8 93 aa17.38■□□□□ 0.37
SHMT2-204ENST00000553324 DHX38Q92620 1227 aaKnown RBP17.38■□□□□ 0.37
SHMT2-204ENST00000553324 RIT2Q99578 217 aa17.38■□□□□ 0.37
SHMT2-204ENST00000553324 IGKV6D-21A0A0A0MT36 114 aa17.37■□□□□ 0.37
SHMT2-204ENST00000553324 DDX39AO00148 427 aaKnown RBP17.37■□□□□ 0.37
SHMT2-204ENST00000553324 BACH1O14867 736 aa17.37■□□□□ 0.37
SHMT2-204ENST00000553324 MARK3P27448 753 aa17.37■□□□□ 0.37
SHMT2-204ENST00000553324 THPOP40225 353 aa17.37■□□□□ 0.37
SHMT2-204ENST00000553324 HIC1Q14526 733 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms