RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 X6R8D5 127 aa6.67□□□□□ -1.34
SCFD1-209ENST00000553280 H7C1D1 291 aa6.66□□□□□ -1.34
SCFD1-209ENST00000553280 CAND2O75155 1236 aa6.66□□□□□ -1.34
SCFD1-209ENST00000553280 MYBL2P10244 700 aa6.66□□□□□ -1.34
SCFD1-209ENST00000553280 GNAT1P11488 350 aa6.66□□□□□ -1.34
SCFD1-209ENST00000553280 RAC2P15153 192 aa6.66□□□□□ -1.34
SCFD1-209ENST00000553280 ATF3P18847 181 aa6.66□□□□□ -1.34
SCFD1-209ENST00000553280 TRHRP34981 398 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-209ENST00000553280 SPIRE1Q08AE8 756 aa6.66□□□□□ -1.34
SCFD1-209ENST00000553280 ABCB5Q2M3G0 1257 aa6.66□□□□□ -1.34
SCFD1-209ENST00000553280 ARHGAP36Q6ZRI8 547 aa6.66□□□□□ -1.34
SCFD1-209ENST00000553280 JPH3Q8WXH2 748 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-209ENST00000553280 TRMT2BQ96GJ1 504 aaKnown RBP6.66□□□□□ -1.34
SCFD1-209ENST00000553280 FAM84AQ96KN4 292 aa6.66□□□□□ -1.34
SCFD1-209ENST00000553280 RHOBTB2Q9BYZ6 727 aa6.66□□□□□ -1.34
SCFD1-209ENST00000553280 GOLGA6CA6NDK9 693 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 GOLGA6BA6NDN3 693 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 FADS2P1A8MWK0 482 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 FZD9O00144 591 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 GOLGA6DP0CG33 693 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 CCND1P24385 295 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 IARSP41252 1262 aaKnown RBP6.65□□□□□ -1.34
SCFD1-209ENST00000553280 PHC1P78364 1004 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 KRT85P78386 507 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 SMAD3P84022 425 aaKnown RBP6.65□□□□□ -1.34
SCFD1-209ENST00000553280 TERF2Q15554 542 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 ZNF174Q15697 407 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 SMAD2Q15796 467 aaKnown RBP6.65□□□□□ -1.34
SCFD1-209ENST00000553280 MAP9Q49MG5 647 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 OTOP3Q7RTS5 596 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 RASSF3Q86WH2 238 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 MAGEB6Q8N7X4 407 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 PLEKHO2Q8TD55 490 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 MYLIPQ8WY64 445 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 FAXDC2Q96IV6 333 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 KCNK12Q9HB15 430 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 LUC7LQ9NQ29 371 aaKnown RBP6.65□□□□□ -1.34
SCFD1-209ENST00000553280 C14orf119Q9NWQ9 140 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 BTG4Q9NY30 223 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 GOLGA6AQ9NYA3 693 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.65□□□□□ -1.34
SCFD1-209ENST00000553280 GULP1Q9UBP9 304 aa6.65□□□□□ -1.34
SCFD1-209ENST00000553280 LUC7L2Q9Y383 392 aaKnown RBP6.65□□□□□ -1.34
SCFD1-209ENST00000553280 A0A1W2PQ45 241 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-209ENST00000553280 A0A1W2PQY0 241 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 TCRBV5S4A2TA0A5A2 114 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 PLEKHD1A6NEE1 506 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 C22orf46C9J442 243 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 DVL2O14641 736 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 TPD52L2O43399 206 aaKnown RBP6.64□□□□□ -1.35
SCFD1-209ENST00000553280 PEX14O75381 377 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 DGKIO75912 1065 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 SNUPNO95149 360 aaKnown RBP6.64□□□□□ -1.35
SCFD1-209ENST00000553280 CFBP00751 764 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 RBP3P10745 1247 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 COL6A2P12110 1019 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 KRT15P19012 456 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 LSP1P33241 339 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 IRF9Q00978 393 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 MLC1Q15049 377 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 GPR158Q5T848 1215 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 CERS3Q8IU89 383 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 TEX2Q8IWB9 1127 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 C1orf162Q8NEQ5 155 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-209ENST00000553280 LINC01599Q8WXQ3 324 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 MAP6Q96JE9 813 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 G6PC3Q9BUM1 346 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 EPB41L1Q9H4G0 881 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 NSUN3Q9H649 340 aaKnown RBP6.64□□□□□ -1.35
SCFD1-209ENST00000553280 C19orf44Q9H6X5 657 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 MARCH2Q9P0N8 246 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 IP6K2Q9UHH9 426 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 NOB1Q9ULX3 412 aaKnown RBP6.64□□□□□ -1.35
SCFD1-209ENST00000553280 ZNF652Q9Y2D9 606 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 WASHC2AQ641Q2 1341 aa6.64□□□□□ -1.35
SCFD1-209ENST00000553280 NKRFO15226 690 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCFD1-209ENST00000553280 KRT37O76014 449 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 HPXP02790 462 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 FUCA1P04066 466 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 ZGLP1P0C6A0 271 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 U2AF1L5P0DN76 240 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-209ENST00000553280 SLC9A1P19634 815 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 FPR2P25090 351 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 RECQLP46063 649 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-209ENST00000553280 CORO7P57737 925 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 U2AF1Q01081 240 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCFD1-209ENST00000553280 PCBP2Q15366 365 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCFD1-209ENST00000553280 CXorf57Q6NSI4 855 aaKnown RBP6.63□□□□□ -1.35
SCFD1-209ENST00000553280 PGM2L1Q6PCE3 622 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 SLCO6A1Q86UG4 719 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 PTRH1Q86Y79 214 aaKnown RBP6.63□□□□□ -1.35
SCFD1-209ENST00000553280 RIOX2Q8IUF8 465 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 CPA6Q8N4T0 437 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 KIAA1958Q8N8K9 716 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 ZNF610Q8N9Z0 462 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCFD1-209ENST00000553280 SYTL4Q96C24 671 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-209ENST00000553280 HHIPL1Q96JK4 782 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 JMJD8Q96S16 334 aa6.63□□□□□ -1.35
SCFD1-209ENST00000553280 PSMD1Q99460 953 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms