RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 RIC8AQ9NPQ8 531 aa12.13□□□□□ -0.47
DDX23-217ENST00000553065 SEC63Q9UGP8 760 aaKnown RBP12.13□□□□□ -0.47
DDX23-217ENST00000553065 KLF18A0A0U1RQI7 1052 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 ABHD14A-ACY1A0A1B0GW23 586 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 ZBTB43O43298 467 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 GJB5O95377 273 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 TCF7P36402 384 aaPredicted RBP12.12□□□□□ -0.47
DDX23-217ENST00000553065 APOBRQ0VD83 1088 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 GRB10Q13322 594 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 ITGB3BPQ13352 177 aaPredicted RBP12.12□□□□□ -0.47
DDX23-217ENST00000553065 FAM26DQ5JW98 314 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 HEATR3Q7Z4Q2 680 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 FBXL16Q8N461 479 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 LMBR1Q8WVP7 490 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 CUL5Q93034 780 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 MXRA8Q9BRK3 442 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 KCNH7Q9NS40 1196 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 PKD2L1Q9P0L9 805 aa12.12□□□□□ -0.47
DDX23-217ENST00000553065 SMCO2A6NFE2 343 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 MEIS1O00470 390 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 DHX15O43143 795 aaKnown RBP12.11□□□□□ -0.47
DDX23-217ENST00000553065 PPFIA3O75145 1194 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 ATG7O95352 703 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 PARNO95453 639 aaKnown RBP12.11□□□□□ -0.47
DDX23-217ENST00000553065 HTRA4P83105 476 aaPredicted RBP12.11□□□□□ -0.47
DDX23-217ENST00000553065 MGAT3Q09327 533 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 RTN1Q16799 776 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 RNF20Q5VTR2 975 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 Q6ZUG5 572 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 NLRX1Q86UT6 975 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 ARNTL2Q8WYA1 636 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 SEPT1Q8WYJ6 367 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 SUGCTQ9HAC7 445 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 BARHL2Q9NY43 387 aa12.11□□□□□ -0.47
DDX23-217ENST00000553065 MBLAC1A4D2B0 266 aaPredicted RBP12.1□□□□□ -0.47
DDX23-217ENST00000553065 LINC01553A4QN01 128 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 NOP56O00567 594 aaKnown RBP12.1□□□□□ -0.47
DDX23-217ENST00000553065 MAFGO15525 162 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 TLL1O43897 1013 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 CCNE2O96020 404 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 CTSHP09668 335 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 BMP1P13497 986 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 EVCP57679 992 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 TFF2Q03403 129 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 IKBKEQ14164 716 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 FAM117BQ6P1L5 589 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 RPAINQ86UA6 219 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 RTN4RL1Q86UN2 441 aaPredicted RBP12.1□□□□□ -0.47
DDX23-217ENST00000553065 ASB2Q96Q27 587 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 RAD9AQ99638 391 aa12.1□□□□□ -0.47
DDX23-217ENST00000553065 RBM28Q9NW13 759 aaKnown RBP12.1□□□□□ -0.47
DDX23-217ENST00000553065 IGLV3-22A0A075B6J6 115 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 IGKV6D-21A0A0A0MT36 114 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 GOLGA8AA7E2F4 631 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 GOLGA8BA8MQT2 603 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 FAM86B1E9PN63 330 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 FAM86B2P0C5J1 330 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 LINC00271P0C7V0 271 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 ATP4AP20648 1035 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 MARK3P27448 753 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 NAPAP54920 295 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 ERVK-21P61565 698 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 ARHGAP4P98171 946 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 MTMR1Q13613 665 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 PFKFB3Q16875 520 aaPredicted RBP12.09□□□□□ -0.47
DDX23-217ENST00000553065 TJAP1Q5JTD0 557 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 CRIPAKQ8N1N5 446 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
DDX23-217ENST00000553065 ATXN2LQ8WWM7 1075 aaKnown RBP12.09□□□□□ -0.47
DDX23-217ENST00000553065 BRF1Q92994 677 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 TOP1MTQ969P6 601 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 JAKMIP1Q96N16 626 aaKnown RBP12.09□□□□□ -0.47
DDX23-217ENST00000553065 UIMC1Q96RL1 719 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 ANO3Q9BYT9 981 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 AGO4Q9HCK5 861 aaKnown RBP12.09□□□□□ -0.47
DDX23-217ENST00000553065 NRCAMQ92823 1304 aa12.09□□□□□ -0.47
DDX23-217ENST00000553065 SPDYE3A6NKU9 549 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 KIF28PB7ZC32 967 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 INSRRP14616 1297 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 RPS6KB1P23443 525 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 SREBF1P36956 1147 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 KCNJ6P48051 423 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 RCAN1P53805 252 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 TOB2Q14106 344 aaPredicted RBP12.08□□□□□ -0.48
DDX23-217ENST00000553065 LPIN1Q14693 890 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 PLCB4Q15147 1175 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 GRIK4Q16099 956 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 CEP55Q53EZ4 464 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 JAKMIP3Q5VZ66 844 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 ABHD15Q6UXT9 468 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 SYNE3Q6ZMZ3 975 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 GIMAP8Q8ND71 665 aaPredicted RBP12.08□□□□□ -0.48
DDX23-217ENST00000553065 TRAPPC12Q8WVT3 735 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 DNAJB3Q8WWF6 145 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 PHKBQ93100 1093 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 C17orf80Q9BSJ5 609 aa12.08□□□□□ -0.48
DDX23-217ENST00000553065 AGO3Q9H9G7 860 aaKnown RBP12.08□□□□□ -0.48
DDX23-217ENST00000553065 NFASCO94856 1347 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms