RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ANO3Q9BYT9 981 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 PCDHA2Q9Y5H9 948 aa14.37□□□□□ -0.11
CACNB3-219ENST00000551544 FTCDO95954 541 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 HOXA7P31268 230 aaPredicted RBP14.36□□□□□ -0.11
CACNB3-219ENST00000551544 HYIQ5T013 277 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 ZNF572Q7Z3I7 529 aaPredicted RBP14.36□□□□□ -0.11
CACNB3-219ENST00000551544 TRIM59Q8IWR1 403 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 FAM133AQ8N9E0 248 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 PLEKHA4Q9H4M7 779 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 RBM12Q9NTZ6 932 aaKnown RBP14.36□□□□□ -0.11
CACNB3-219ENST00000551544 MYH7BA7E2Y1 1941 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 MEIS1O00470 390 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 PALMO75781 387 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 ITIH3Q06033 890 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 SKIDA1Q1XH10 827 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 FOXR2Q6PJQ5 311 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 NUCKS1Q9H1E3 243 aaKnown RBP14.36□□□□□ -0.11
CACNB3-219ENST00000551544 ADAMTS1Q9UHI8 967 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 ATP6V0A2Q9Y487 856 aa14.36□□□□□ -0.11
CACNB3-219ENST00000551544 POLRMTO00411 1230 aaKnown RBP14.35□□□□□ -0.11
CACNB3-219ENST00000551544 GNA14O95837 355 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 EEF2P13639 858 aaKnown RBP14.35□□□□□ -0.11
CACNB3-219ENST00000551544 NOP2P46087 812 aaKnown RBP14.35□□□□□ -0.11
CACNB3-219ENST00000551544 CDC37Q16543 378 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-219ENST00000551544 PRR16Q569H4 304 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 HAUS3Q68CZ6 603 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 APOBEC3HQ6NTF7 200 aaKnown RBP14.35□□□□□ -0.11
CACNB3-219ENST00000551544 C8orf74Q6P047 294 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 LRRC31Q6UY01 552 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 RNF10Q8N5U6 811 aaKnown RBP14.35□□□□□ -0.11
CACNB3-219ENST00000551544 TEKT1Q969V4 418 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 KCTD10Q9H3F6 313 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 STIM2Q9P246 746 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 SUGT1Q9Y2Z0 365 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 LY75O60449 1722 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 KLRC1P26715 233 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 KLHL30Q0D2K2 578 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 ARSHQ5FYA8 562 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 KCNMB3Q9NPA1 279 aa14.35□□□□□ -0.11
CACNB3-219ENST00000551544 PACSIN2Q9UNF0 486 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-219ENST00000551544 A0A087X0T9 212 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 RBAK-RBAKDNI3L0D1 243 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 FAM228BP0C875 321 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 NR2F2P24468 414 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 CASP5P51878 434 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 RNASE9P60153 205 aaKnown RBP14.34□□□□□ -0.11
CACNB3-219ENST00000551544 PSMC6P62333 389 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 KCNH2Q12809 1159 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 PABPC4Q13310 644 aaKnown RBP eCLIP14.34□□□□□ -0.11
CACNB3-219ENST00000551544 CFAP221Q4G0U5 840 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 SLFN13Q68D06 897 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 NAP1L4Q99733 375 aaKnown RBP14.34□□□□□ -0.11
CACNB3-219ENST00000551544 PACSIN1Q9BY11 444 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 DNAJC18Q9H819 358 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 POLD4Q9HCU8 107 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 LUC7LQ9NQ29 371 aaKnown RBP14.34□□□□□ -0.11
CACNB3-219ENST00000551544 PCDHAC2Q9Y5I4 1007 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 GOLGA6CA6NDK9 693 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 CETN3O15182 167 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 GOLGA6DP0CG33 693 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 ACTN1P12814 892 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 USP11P51784 963 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 KIAA0753Q2KHM9 967 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 CATSPER3Q86XQ3 398 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 SYN2Q92777 582 aaPredicted RBP14.34□□□□□ -0.11
CACNB3-219ENST00000551544 DHX36Q9H2U1 1008 aaKnown RBP14.34□□□□□ -0.11
CACNB3-219ENST00000551544 GOLGA6AQ9NYA3 693 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 MYO3BQ8WXR4 1341 aa14.34□□□□□ -0.11
CACNB3-219ENST00000551544 UBAP1LF5GYI3 381 aa14.33□□□□□ -0.11
CACNB3-219ENST00000551544 TAL1P17542 331 aaPredicted RBP14.33□□□□□ -0.11
CACNB3-219ENST00000551544 MAGEA9P43362 315 aa14.33□□□□□ -0.11
CACNB3-219ENST00000551544 SLC12A3P55017 1021 aa14.33□□□□□ -0.11
CACNB3-219ENST00000551544 IKQ13123 557 aaPredicted RBP14.33□□□□□ -0.11
CACNB3-219ENST00000551544 ASIC2Q16515 512 aa14.33□□□□□ -0.11
CACNB3-219ENST00000551544 SLC18A3Q16572 532 aa14.33□□□□□ -0.11
CACNB3-219ENST00000551544 USH1GQ495M9 461 aa14.33□□□□□ -0.11
CACNB3-219ENST00000551544 FAM76AQ8TAV0 307 aa14.33□□□□□ -0.11
CACNB3-219ENST00000551544 GJD4Q96KN9 370 aaPredicted RBP14.33□□□□□ -0.11
CACNB3-219ENST00000551544 FOCADQ5VW36 1801 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 ARHGAP4P98171 946 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 NAB2Q15742 525 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 ARHGAP27Q6ZUM4 889 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 SLFN12Q8IYM2 578 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 CCDC17Q96LX7 622 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 P2RX7Q99572 595 aaKnown RBP14.33□□□□□ -0.12
CACNB3-219ENST00000551544 KCNQ5Q9NR82 932 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 MEIS2O14770 477 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 RBM5P52756 815 aaKnown RBP eCLIP14.33□□□□□ -0.12
CACNB3-219ENST00000551544 EPHB4P54760 987 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 CERKLQ49MI3 558 aaPredicted RBP14.33□□□□□ -0.12
CACNB3-219ENST00000551544 GLT8D2Q9H1C3 349 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 TSKSQ9UJT2 592 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 HDAC9Q9UKV0 1011 aa14.33□□□□□ -0.12
CACNB3-219ENST00000551544 ESYT3A0FGR9 886 aa14.32□□□□□ -0.12
CACNB3-219ENST00000551544 SLC9A1P19634 815 aa14.32□□□□□ -0.12
CACNB3-219ENST00000551544 CRKP46108 304 aa14.32□□□□□ -0.12
CACNB3-219ENST00000551544 MARSP56192 900 aaKnown RBP14.32□□□□□ -0.12
CACNB3-219ENST00000551544 HHIPL2Q6UWX4 724 aa14.32□□□□□ -0.12
CACNB3-219ENST00000551544 SFR1Q86XK3 245 aa14.32□□□□□ -0.12
CACNB3-219ENST00000551544 KIAA0825Q8IV33 1275 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms