RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SFR1Q86XK3 245 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 MCF2L2Q86YR7 1114 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 ZC3H3Q8IXZ2 948 aaKnown RBP12.78□□□□□ -0.36
RAB5C-208ENST00000551338 KCTD17Q8N5Z5 321 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 SAMD3Q8N6K7 520 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 ZNF280CQ8ND82 737 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 ZNF592Q92610 1267 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 KLRG1Q96E93 195 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 EEF2KMTQ96G04 330 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 WNK4Q96J92 1243 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 ERGIC2Q96RQ1 377 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 HSD17B14Q9BPX1 270 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 ZNF577Q9BSK1 485 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 DESI2Q9BSY9 194 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 RUSC1Q9BVN2 902 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 UNC45AQ9H3U1 944 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 DNM3Q9UQ16 869 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 UBIAD1Q9Y5Z9 338 aa12.78□□□□□ -0.36
RAB5C-208ENST00000551338 TTC26A0AVF1 554 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 PES1O00541 588 aaKnown RBP12.77□□□□□ -0.37
RAB5C-208ENST00000551338 CHMP2AO43633 222 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 ZBED4O75132 1171 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 FGFR1OPO95684 399 aaKnown RBP12.77□□□□□ -0.37
RAB5C-208ENST00000551338 TUBB4AP04350 444 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 FDX1P10109 184 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 BCRP11274 1271 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 ITGB5P18084 799 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 MUTP22033 750 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 KRT9P35527 623 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 KLK7P49862 253 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 CTTNQ14247 550 aaKnown RBP12.77□□□□□ -0.37
RAB5C-208ENST00000551338 EPHA7Q15375 998 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 SYCP1Q15431 976 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 MAN2A1Q16706 1144 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 HERC4Q5GLZ8 1057 aaPredicted RBP12.77□□□□□ -0.37
RAB5C-208ENST00000551338 KRT26Q7Z3Y9 468 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 KIF18AQ8NI77 898 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 SCFD1Q8WVM8 642 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 NOC4LQ9BVI4 516 aaKnown RBP12.77□□□□□ -0.37
RAB5C-208ENST00000551338 WDR11Q9BZH6 1224 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 BHMT2Q9H2M3 363 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 KCTD10Q9H3F6 313 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 MRPL44Q9H9J2 332 aaKnown RBP12.77□□□□□ -0.37
RAB5C-208ENST00000551338 PICK1Q9NRD5 415 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 MAP3K20Q9NYL2 800 aaKnown RBP12.77□□□□□ -0.37
RAB5C-208ENST00000551338 PNMA2Q9UL42 364 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 PHLPP2Q6ZVD8 1323 aa12.77□□□□□ -0.37
RAB5C-208ENST00000551338 MYH9P35579 1960 aaKnown RBP12.76□□□□□ -0.37
RAB5C-208ENST00000551338 GOLGA6L9A6NEM1 432 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 RSPH10B2B2RC85 870 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 VWA5AO00534 786 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 FANCGO15287 622 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 CTIFO43310 598 aaKnown RBP12.76□□□□□ -0.37
RAB5C-208ENST00000551338 SLITRK3O94933 977 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 RSPH10BP0C881 870 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 DSG3P32926 999 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 CASP5P51878 434 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 ETF1P62495 437 aaKnown RBP12.76□□□□□ -0.37
RAB5C-208ENST00000551338 MRPS9P82933 396 aaKnown RBP12.76□□□□□ -0.37
RAB5C-208ENST00000551338 TBC1D8BQ0IIM8 1120 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 VWA3BQ502W6 1294 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 PCNX4Q63HM2 1172 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 RINT1Q6NUQ1 792 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 SYT10Q6XYQ8 523 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 EPM2AIP1Q7L775 607 aaPredicted RBP12.76□□□□□ -0.37
RAB5C-208ENST00000551338 TMTC1Q8IUR5 882 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 NELFCDQ8IXH7 590 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 TSC1Q92574 1164 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 TAAR1Q96RJ0 339 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 RIT2Q99578 217 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 JADE2Q9NQC1 790 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 HOMER2Q9NSB8 354 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 WRAP73Q9P2S5 460 aaPredicted RBP12.76□□□□□ -0.37
RAB5C-208ENST00000551338 CAPN11Q9UMQ6 739 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 ADGRG1Q9Y653 693 aa12.76□□□□□ -0.37
RAB5C-208ENST00000551338 C19orf81C9J6K1 198 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 IPO5O00410 1097 aaKnown RBP12.75□□□□□ -0.37
RAB5C-208ENST00000551338 DHX15O43143 795 aaKnown RBP12.75□□□□□ -0.37
RAB5C-208ENST00000551338 KIF20AO95235 890 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 CCDC175P0C221 793 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 HMGCS2P54868 508 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 RPS6P62753 249 aaKnown RBP12.75□□□□□ -0.37
RAB5C-208ENST00000551338 FKBP3Q00688 224 aaKnown RBP12.75□□□□□ -0.37
RAB5C-208ENST00000551338 PGM5Q15124 567 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 TKFCQ3LXA3 575 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 FIGNQ5HY92 759 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 FKBP15Q5T1M5 1219 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 C1orf186Q6ZWK4 172 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 TPH2Q8IWU9 490 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.75□□□□□ -0.37
RAB5C-208ENST00000551338 NEK9Q8TD19 979 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 PIGOQ8TEQ8 1089 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 CEP63Q96MT8 703 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 TRERF1Q96PN7 1200 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 DNAJC7Q99615 494 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 NUP58Q9BVL2 599 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
RAB5C-208ENST00000551338 ZHX3Q9H4I2 956 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 BCAS3Q9H6U6 928 aa12.75□□□□□ -0.37
RAB5C-208ENST00000551338 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms