RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 C16orf70Q9BSU1 422 aa15.94■□□□□ 0.14
SNRPF-203ENST00000551316 SH2B1Q9NRF2 756 aaPredicted RBP15.94■□□□□ 0.14
SNRPF-203ENST00000551316 LIMD1Q9UGP4 676 aa15.94■□□□□ 0.14
SNRPF-203ENST00000551316 DDX41Q9UJV9 622 aaKnown RBP15.94■□□□□ 0.14
SNRPF-203ENST00000551316 LOC400499M0QZD8 3231 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 POTEMA6NI47 508 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 ENPP3O14638 875 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 CHRNA1P02708 482 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 SMIM10L2AP0DMW4 78 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 SMIM10L2BP0DMW5 78 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 HSDL1Q3SXM5 330 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 RCSD1Q6JBY9 416 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 KANK3Q6NY19 840 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 POTEGQ6S5H5 508 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 TMEM184AQ6ZMB5 413 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 SIX5Q8N196 739 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 DNERQ8NFT8 737 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 NEDD1Q8NHV4 660 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 PPTC7Q8NI37 304 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 EMID1Q96A84 441 aaPredicted RBP15.93■□□□□ 0.14
SNRPF-203ENST00000551316 CLUAP1Q96AJ1 413 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 PAG1Q9NWQ8 432 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 NR2E1Q9Y466 385 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 DSPP15924 2871 aaKnown RBP15.93■□□□□ 0.14
SNRPF-203ENST00000551316 MIA3Q5JRA6 1907 aa15.93■□□□□ 0.14
SNRPF-203ENST00000551316 C17orf102A2RUQ5 167 aa15.92■□□□□ 0.14
SNRPF-203ENST00000551316 FSCN2O14926 492 aa15.92■□□□□ 0.14
SNRPF-203ENST00000551316 SP9P0CG40 484 aa15.92■□□□□ 0.14
SNRPF-203ENST00000551316 LPIN1Q14693 890 aa15.92■□□□□ 0.14
SNRPF-203ENST00000551316 CMTR2Q8IYT2 770 aaKnown RBP15.92■□□□□ 0.14
SNRPF-203ENST00000551316 FAM9BQ8IZU0 186 aa15.92■□□□□ 0.14
SNRPF-203ENST00000551316 DDRGK1Q96HY6 314 aa15.92■□□□□ 0.14
SNRPF-203ENST00000551316 STRBPQ96SI9 672 aaKnown RBP15.92■□□□□ 0.14
SNRPF-203ENST00000551316 RNPEPQ9H4A4 650 aa15.92■□□□□ 0.14
SNRPF-203ENST00000551316 FRMPD2Q68DX3 1309 aaPredicted RBP15.92■□□□□ 0.14
SNRPF-203ENST00000551316 KAT6AQ92794 2004 aa15.91■□□□□ 0.14
SNRPF-203ENST00000551316 HIDE1A8MVS5 230 aa15.91■□□□□ 0.14
SNRPF-203ENST00000551316 NARSO43776 548 aaKnown RBP15.91■□□□□ 0.14
SNRPF-203ENST00000551316 RARSP54136 660 aaKnown RBP15.91■□□□□ 0.14
SNRPF-203ENST00000551316 CCDC96Q2M329 555 aa15.91■□□□□ 0.14
SNRPF-203ENST00000551316 NAALADL2Q58DX5 795 aa15.91■□□□□ 0.14
SNRPF-203ENST00000551316 FAM26DQ5JW98 314 aa15.91■□□□□ 0.14
SNRPF-203ENST00000551316 PLPP4Q5VZY2 271 aa15.91■□□□□ 0.14
SNRPF-203ENST00000551316 RTN4RL1Q86UN2 441 aaPredicted RBP15.91■□□□□ 0.14
SNRPF-203ENST00000551316 TAAR1Q96RJ0 339 aa15.91■□□□□ 0.14
SNRPF-203ENST00000551316 BCAS3Q9H6U6 928 aa15.91■□□□□ 0.14
SNRPF-203ENST00000551316 EHMT1Q9H9B1 1298 aa15.91■□□□□ 0.14
SNRPF-203ENST00000551316 IL17RBQ9NRM6 502 aa15.91■□□□□ 0.14
SNRPF-203ENST00000551316 AKAP13Q12802 2813 aa15.91■□□□□ 0.14
SNRPF-203ENST00000551316 KRBA1A5PL33 1030 aa15.9■□□□□ 0.14
SNRPF-203ENST00000551316 MGAT3Q09327 533 aa15.9■□□□□ 0.14
SNRPF-203ENST00000551316 UBE3CQ15386 1083 aa15.9■□□□□ 0.14
SNRPF-203ENST00000551316 SYDE2Q5VT97 1194 aa15.9■□□□□ 0.14
SNRPF-203ENST00000551316 RUFY4Q6ZNE9 571 aa15.9■□□□□ 0.14
SNRPF-203ENST00000551316 ZNF444Q8N0Y2 327 aaPredicted RBP15.9■□□□□ 0.14
SNRPF-203ENST00000551316 TMEM57Q8N5G2 664 aa15.9■□□□□ 0.14
SNRPF-203ENST00000551316 MICAL1Q8TDZ2 1067 aa15.9■□□□□ 0.14
SNRPF-203ENST00000551316 BOLA2Q9H3K6 86 aa15.9■□□□□ 0.14
SNRPF-203ENST00000551316 TELO2Q9Y4R8 837 aa15.9■□□□□ 0.14
SNRPF-203ENST00000551316 ZIC2O95409 532 aaPredicted RBP15.89■□□□□ 0.13
SNRPF-203ENST00000551316 TSPY3P0CV98 308 aa15.89■□□□□ 0.13
SNRPF-203ENST00000551316 TSPY8P0CW00 308 aa15.89■□□□□ 0.13
SNRPF-203ENST00000551316 TGM1P22735 817 aa15.89■□□□□ 0.13
SNRPF-203ENST00000551316 TFAP4Q01664 338 aa15.89■□□□□ 0.13
SNRPF-203ENST00000551316 TRMT2AQ8IZ69 625 aaKnown RBP15.89■□□□□ 0.13
SNRPF-203ENST00000551316 MAML2Q8IZL2 1156 aaPredicted RBP15.89■□□□□ 0.13
SNRPF-203ENST00000551316 TDRD5Q8NAT2 981 aaKnown RBP15.89■□□□□ 0.13
SNRPF-203ENST00000551316 GPKOWQ92917 476 aaPredicted RBP eCLIP15.89■□□□□ 0.13
SNRPF-203ENST00000551316 RTP3Q9BQQ7 232 aa15.89■□□□□ 0.13
SNRPF-203ENST00000551316 PARD6AQ9NPB6 346 aa15.89■□□□□ 0.13
SNRPF-203ENST00000551316 SETD4Q9NVD3 440 aa15.89■□□□□ 0.13
SNRPF-203ENST00000551316 DLGAP2Q9P1A6 1054 aa15.89■□□□□ 0.13
SNRPF-203ENST00000551316 CDV3Q9UKY7 258 aaKnown RBP15.89■□□□□ 0.13
SNRPF-203ENST00000551316 CNOT1A5YKK6 2376 aaKnown RBP15.89■□□□□ 0.13
SNRPF-203ENST00000551316 CAND2O75155 1236 aa15.88■□□□□ 0.13
SNRPF-203ENST00000551316 PPM1JQ5JR12 505 aa15.88■□□□□ 0.13
SNRPF-203ENST00000551316 SPECC1Q5M775 1068 aa15.88■□□□□ 0.13
SNRPF-203ENST00000551316 BTNL9Q6UXG8 535 aa15.88■□□□□ 0.13
SNRPF-203ENST00000551316 TRIM50Q86XT4 487 aa15.88■□□□□ 0.13
SNRPF-203ENST00000551316 ZDHHC14Q8IZN3 488 aa15.88■□□□□ 0.13
SNRPF-203ENST00000551316 C12orf76Q8N812 135 aaPredicted RBP15.88■□□□□ 0.13
SNRPF-203ENST00000551316 ARHGAP45Q92619 1136 aa15.88■□□□□ 0.13
SNRPF-203ENST00000551316 CDCA3Q99618 268 aaPredicted RBP15.88■□□□□ 0.13
SNRPF-203ENST00000551316 AGO3Q9H9G7 860 aaKnown RBP15.88■□□□□ 0.13
SNRPF-203ENST00000551316 AAASQ9NRG9 546 aa15.88■□□□□ 0.13
SNRPF-203ENST00000551316 STX8Q9UNK0 236 aa15.88■□□□□ 0.13
SNRPF-203ENST00000551316 DCNP07585 359 aaKnown RBP15.87■□□□□ 0.13
SNRPF-203ENST00000551316 ADAM17P78536 824 aa15.87■□□□□ 0.13
SNRPF-203ENST00000551316 SP2Q02086 613 aa15.87■□□□□ 0.13
SNRPF-203ENST00000551316 MYSM1Q5VVJ2 828 aa15.87■□□□□ 0.13
SNRPF-203ENST00000551316 SYTL5Q8TDW5 730 aaPredicted RBP15.87■□□□□ 0.13
SNRPF-203ENST00000551316 BCL11AQ9H165 835 aa15.87■□□□□ 0.13
SNRPF-203ENST00000551316 GPCPD1Q9NPB8 672 aa15.87■□□□□ 0.13
SNRPF-203ENST00000551316 DUSP12Q9UNI6 340 aa15.87■□□□□ 0.13
SNRPF-203ENST00000551316 MRVI1Q9Y6F6 885 aa15.87■□□□□ 0.13
SNRPF-203ENST00000551316 LAMA4Q16363 1823 aa15.87■□□□□ 0.13
SNRPF-203ENST00000551316 FGF18O76093 207 aa15.86■□□□□ 0.13
SNRPF-203ENST00000551316 LGALS2P05162 132 aa15.86■□□□□ 0.13
SNRPF-203ENST00000551316 GLULP15104 373 aa15.86■□□□□ 0.13
SNRPF-203ENST00000551316 EIF2AK2P19525 551 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms