RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 CAPRIN2Q6IMN6 1127 aaKnown RBP13.39□□□□□ -0.27
ERBB3-219ENST00000551242 TAX1BP1Q86VP1 789 aa13.39□□□□□ -0.27
ERBB3-219ENST00000551242 SPICE1Q8N0Z3 855 aa13.39□□□□□ -0.27
ERBB3-219ENST00000551242 FAM133AQ8N9E0 248 aa13.39□□□□□ -0.27
ERBB3-219ENST00000551242 PARD3BQ8TEW8 1205 aa13.39□□□□□ -0.27
ERBB3-219ENST00000551242 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.39□□□□□ -0.27
ERBB3-219ENST00000551242 ZBTB10Q96DT7 871 aa13.39□□□□□ -0.27
ERBB3-219ENST00000551242 PCDHA6Q9UN73 950 aa13.39□□□□□ -0.27
ERBB3-219ENST00000551242 PCDHA8Q9Y5H6 950 aa13.39□□□□□ -0.27
ERBB3-219ENST00000551242 BAZ2AQ9UIF9 1905 aaKnown RBP13.39□□□□□ -0.27
ERBB3-219ENST00000551242 TLDC2A0PJX2 215 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 A8MUI8 341 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 KIF4AO95239 1232 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 TECP42680 631 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 MTMR3Q13615 1198 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 CDCA2Q69YH5 1023 aaPredicted RBP13.38□□□□□ -0.27
ERBB3-219ENST00000551242 CRELD2Q6UXH1 353 aaPredicted RBP13.38□□□□□ -0.27
ERBB3-219ENST00000551242 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
ERBB3-219ENST00000551242 LSM14BQ9BX40 385 aaKnown RBP13.38□□□□□ -0.27
ERBB3-219ENST00000551242 NOC2LQ9Y3T9 749 aaKnown RBP13.38□□□□□ -0.27
ERBB3-219ENST00000551242 ATP6V0A2Q9Y487 856 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 USP17L12C9JPN9 530 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 USP17L21D6R901 530 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 LRRC55Q6ZSA7 311 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 DNAJC10Q8IXB1 793 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 BATF3Q9NR55 127 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 SPATS2LQ9NUQ6 558 aaKnown RBP13.38□□□□□ -0.27
ERBB3-219ENST00000551242 CD2APQ9Y5K6 639 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 BCORQ6W2J9 1755 aa13.38□□□□□ -0.27
ERBB3-219ENST00000551242 IFNAR2P48551 515 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 GIGYF2Q6Y7W6 1299 aaKnown RBP13.37□□□□□ -0.27
ERBB3-219ENST00000551242 BRINP3Q76B58 766 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 TRPM8Q7Z2W7 1104 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 KIF2BQ8N4N8 673 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 METTL13Q8N6R0 699 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 TLCD1Q96CP7 247 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 NLRP3Q96P20 1036 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 TRIM51Q9BSJ1 452 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 LUC7LQ9NQ29 371 aaKnown RBP13.37□□□□□ -0.27
ERBB3-219ENST00000551242 PRDM11Q9NQV5 511 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 MYH1P12882 1939 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 MYMKA6NI61 221 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 VIMP08670 466 aaKnown RBP13.37□□□□□ -0.27
ERBB3-219ENST00000551242 ALDH5A1P51649 535 aaPredicted RBP13.37□□□□□ -0.27
ERBB3-219ENST00000551242 KLHL30Q0D2K2 578 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 LETM2Q2VYF4 491 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 MAEAQ7L5Y9 396 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 EIF1ADQ8N9N8 165 aaKnown RBP13.37□□□□□ -0.27
ERBB3-219ENST00000551242 SAAL1Q96ER3 474 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 FAM167BQ9BTA0 163 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 YIPF3Q9GZM5 350 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 CNOT10Q9H9A5 744 aaKnown RBP13.37□□□□□ -0.27
ERBB3-219ENST00000551242 NOP53Q9NZM5 478 aaKnown RBP13.37□□□□□ -0.27
ERBB3-219ENST00000551242 CEP72Q9P209 647 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 MYH4Q9Y623 1939 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 A0A0G2JS52 829 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 FAM170AA1A519 330 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 PGRMC1O00264 195 aaKnown RBP13.37□□□□□ -0.27
ERBB3-219ENST00000551242 UBOX5O94941 541 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 USP11P51784 963 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 RIPK1Q13546 671 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 HEATR3Q7Z4Q2 680 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 PIGWQ7Z7B1 504 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
ERBB3-219ENST00000551242 ATXN2LQ8WWM7 1075 aaKnown RBP13.37□□□□□ -0.27
ERBB3-219ENST00000551242 PRMT1Q99873 361 aaKnown RBP13.37□□□□□ -0.27
ERBB3-219ENST00000551242 CUEDC2Q9H467 287 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 GOPCQ9HD26 462 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 MROH5Q6ZUA9 1318 aa13.37□□□□□ -0.27
ERBB3-219ENST00000551242 M0R2N6 131 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 SMNDC1O75940 238 aaKnown RBP eCLIP13.36□□□□□ -0.27
ERBB3-219ENST00000551242 IFI35P80217 286 aaPredicted RBP13.36□□□□□ -0.27
ERBB3-219ENST00000551242 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 ERICH1Q86X53 443 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 UHMK1Q8TAS1 419 aaKnown RBP13.36□□□□□ -0.27
ERBB3-219ENST00000551242 ACSBG1Q96GR2 724 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 RIOK1Q9BRS2 568 aaKnown RBP13.36□□□□□ -0.27
ERBB3-219ENST00000551242 MMTAG2Q9BU76 263 aaKnown RBP13.36□□□□□ -0.27
ERBB3-219ENST00000551242 ADAM7Q9H2U9 754 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 KCNMB3Q9NPA1 279 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 SAMD15Q9P1V8 674 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 KCPQ6ZWJ8 1503 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 KDM4FA0A1W2PPD8 638 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 CCNT1O60563 726 aaKnown RBP13.36□□□□□ -0.27
ERBB3-219ENST00000551242 AP1G2O75843 785 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 GSTA1P08263 222 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 AMPD3Q01432 767 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 MAP2K1Q02750 393 aaPredicted RBP13.36□□□□□ -0.27
ERBB3-219ENST00000551242 SEMA3FQ13275 785 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 ZNF268Q14587 947 aaPredicted RBP13.36□□□□□ -0.27
ERBB3-219ENST00000551242 THEMIS2Q5TEJ8 643 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 ACTRT1Q8TDG2 376 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.36□□□□□ -0.274e-7■■■□□ 14.8
ERBB3-219ENST00000551242 STK38LQ9Y2H1 464 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 THRAP3Q9Y2W1 955 aaKnown RBP13.36□□□□□ -0.27
ERBB3-219ENST00000551242 NR2E1Q9Y466 385 aa13.36□□□□□ -0.27
ERBB3-219ENST00000551242 BHMG1C9JSJ3 638 aaPredicted RBP13.35□□□□□ -0.27
ERBB3-219ENST00000551242 IGF2BP3O00425 579 aaKnown RBP eCLIP13.35□□□□□ -0.276e-9■■■□□ 16.7
ERBB3-219ENST00000551242 PDE8AO60658 829 aa13.35□□□□□ -0.27
ERBB3-219ENST00000551242 NQO1P15559 274 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms